| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1998 |
|---|
| Symbol | |
|---|
| ID | 6355502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2218712 |
|---|
| End bp | 2219377 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642669596 |
|---|
| Product | segregation and condensation protein B |
|---|
| Protein accession | YP_001944009 |
|---|
| Protein GI | 189347480 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGGG CACCTCTGCC GGCTCGCCAT TCAAACGCTA CGGAACAAGA AGCGGTGCAT
GAACCTGAAT TGCCATTGTC GCAGCAGATT GAAGCTGTGA TTTTCGCTTC CGAGGAAGCC
GTAACGCTCT CTTCGATCAG GCAAATTACG GGCGCGGAGA TTTCACTCTC TCAGCTCGAT
CTGCTGATTT CTGCCCTGAA CGACGGCTAT GCTGCCTCAG GGCTTACATT CCGCATCCAT
CGCATTGCGG GTGGTTACCG GTTTCTCACC GAACCCCGGT TCTGCGAGCT TCTTAAAAGA
ATACAGGCGC CGAAAGTTCG CCGAAAACTA TCGAATTCGA TACTCGAGGT GCTTTCGGTT
ATCGCCTACA AACAGCCTGT TACCAAGGGT GAAATCCAGC AGCTTCGGGG AACGGCTCCC
GATTATGCCG TGGATCGTCT GCTTGAAAGA GGTTTTATTA CCGTATATGG ACGGGCAGAT
TCTCCCGGAC GTCCGCTCCA GTACGGAACG ACAGATGACT TTCTCGATTT GTTCGGCCTG
CATTCACTCA GGGATCTGCC GAAATTGAGG GAGATCAGGG AGATTCTGCA GGAACATGAA
GAACAGGAAT ATCTTGCAGG AAAAGCTGAT AACGATTGTC GGGATTCCAT AAACAATGAT
GAGTAG
|
|---|
| Protein sequence | MLRAPLPARH SNATEQEAVH EPELPLSQQI EAVIFASEEA VTLSSIRQIT GAEISLSQLD
LLISALNDGY AASGLTFRIH RIAGGYRFLT EPRFCELLKR IQAPKVRRKL SNSILEVLSV
IAYKQPVTKG EIQQLRGTAP DYAVDRLLER GFITVYGRAD SPGRPLQYGT TDDFLDLFGL
HSLRDLPKLR EIREILQEHE EQEYLAGKAD NDCRDSINND E
|
|---|
| |