Gene Clim_1992 details

Gene Information

• Locus tag: Clim_1992
• ID: 6355496
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2210148
• End bp: 2211983
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642669590
• Product: para-aminobenzoate synthase, subunit I
• Protein accession: YP_001944003
• Protein GI: 189347474
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; [COG0147] Anthranilate/para-aminobenzoate synthases component I
• TIGRFAM ID: [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCCCC GTTCCTCTCA ATCTCTCTTT TCAAAACCCG GGACACTCTG GTTTGAAACA 
GCGGGAACCG GCCGAAAGGG AGGAGAGGCG CTGCTTTTTA CTGATCCTGT CGATACCCTT 
ACCCTTACAT CACGTTCCGG ACTGTACGAT TTTTTTCTGG CAATCGAGAA AAAACGGGAT 
GCAGGTTTTT TTCTGGCCGG ATGGCTGGGT TACGAGGCCG GTTGCGGATT TGAGCCGTTG 
GTGACCCGTT CGCCTTCTTC GCCGCCAGGA GCGCCTCTTG CCTGGTTCGG GGTTTATGAG 
AACCCGCAGT GTTTTGTCGG GTCGGATATC GATGCATTTC TGGCCGGGGC GAGTGAGCCA 
TGTATGGTCA GCCGGCTTCA GTTTGATTAT GCCGAGGATG ACTATGTGGT GGTTATACGG 
GCCATAAAAG AGCAGATAGC CGCAGGAAAC GTCTATCAGG TGAACTTTAC CGGCCGCTAC 
CGGTTCGCTT TCAGCGGCTC GCCGCAAACG CTGTTTTTAA CATTGCGGAG CAGTCAGCCT 
TCCGCCTATA CGGCTTTTCT CAATACCGGT GACAGGGTTG TGCTTTCGTT GTCGCCGGAG 
CTGTTTTTCA GGTGCAGCGG AGGAATGATC GAGACGATGC CCATGAAGGG CACCGCCCCG 
AGAGGGGAGA CTCCCGAAGA GGATGCGCTG ATGAAGCACG GGCTTTCCCG ATGCGAAAAA 
AACCGGGCAG AGAACCTGAT GATCGTCGAT CTTCTGCGAA ACGATCTTGG CCGAATCTGT 
CTTCCGGGCT CCGTTCATGC CGGTGAACTG TTCGCTACCG AGACCTATCC GACCCTGCAC 
CAGATGGTAT CCACGATACG CGGCAGGCTT GCGGAGCATA TTGGGCTTTA CGATATCTTT 
CGCGCGCTTT TCCCCTCAGG TTCGGTAACC GGCGCACCTA AAATAAGCGC CATGCAGCTT 
ATCGGCGAAC TTGAGCCGAC GTCAAGAGGA ATCTACACCG GAGCTATCGG TATTGTGAAG 
CCGGATGGCG ATATGGTTTT CAATGTCGCT ATCCGTACCA TAGAGATTTC CGGTCAAACG 
GGCACGTACG GTTCTGGCAG CGGGATTGTG TGGGATTCGG ATCCATTGCA GGAGTTTCGG 
GAGTGCATGC TCAAGGCCAG GATTATCAGT GATGAAGTTC AGGAAATTCC GGAGCTTTTC 
GAGACACTGC TCTGGGCAGG AAGATATCTC TGGCTTGATG AACATCTCGG GAGGATCCGA 
ACCTCGGCAG CTGCGCTTGG AGTTTCCTTT CAGGAAAATG AGGCCCGTTA CCGGCTTGAC 
CGGCTCGATT GCGCACTTGC TGCTTGCGGT GGACGCTTCA AGGTGAGGTT GAGGCTTTCC 
GGTGAAGGTC GCATTACCGT CGGGCATGAA CCGATCGATG CGACTCCTTC GGAAAAGCCG 
CTGAAGCTCT GCTCTGCGGC AGAGCGCATT GCCTCGACGG ATTTTCTCCG ATATCACAAA 
ACCGGTTCGC GGAAACTCTA TGACCGTTTC TACCGCCTGG CGCTCGATCA TGGGTATAAT 
GAGGTGGTGT TTTTCAATGA ACGGGAAGAG GTTGCTGAAG CGGCAGTCAG CAATATCATA 
ATCCGCAGTG GAACTCTTTA CTATACACCG CCGGTAACCT CGGGTCTGCT CGATGGTATA 
TACCGGAGTT ATTTTTTACG CACCCGTTCG GAATGCATCG AAAAAGTGCT TTTCATCGAT 
GATCTGTTAG CTGCCGACGC CATCTATCTC TGCAATTCGG TCAGGGGAAT GCGCCGGGCG 
ATATTCGATG GAACGCAACT TACGGGTAAC GGTTGA 

 

Protein sequence

MAPRSSQSLF SKPGTLWFET AGTGRKGGEA LLFTDPVDTL TLTSRSGLYD FFLAIEKKRD 
AGFFLAGWLG YEAGCGFEPL VTRSPSSPPG APLAWFGVYE NPQCFVGSDI DAFLAGASEP 
CMVSRLQFDY AEDDYVVVIR AIKEQIAAGN VYQVNFTGRY RFAFSGSPQT LFLTLRSSQP 
SAYTAFLNTG DRVVLSLSPE LFFRCSGGMI ETMPMKGTAP RGETPEEDAL MKHGLSRCEK 
NRAENLMIVD LLRNDLGRIC LPGSVHAGEL FATETYPTLH QMVSTIRGRL AEHIGLYDIF 
RALFPSGSVT GAPKISAMQL IGELEPTSRG IYTGAIGIVK PDGDMVFNVA IRTIEISGQT 
GTYGSGSGIV WDSDPLQEFR ECMLKARIIS DEVQEIPELF ETLLWAGRYL WLDEHLGRIR 
TSAAALGVSF QENEARYRLD RLDCALAACG GRFKVRLRLS GEGRITVGHE PIDATPSEKP 
LKLCSAAERI ASTDFLRYHK TGSRKLYDRF YRLALDHGYN EVVFFNEREE VAEAAVSNII 
IRSGTLYYTP PVTSGLLDGI YRSYFLRTRS ECIEKVLFID DLLAADAIYL CNSVRGMRRA 
IFDGTQLTGN G