Gene Clim_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1986 
Symbol 
ID6355490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2203495 
End bp2207031 
Gene Length3537 bp 
Protein Length1178 aa 
Translation table11 
GC content51% 
IMG OID642669584 
Productchromosome segregation protein SMC 
Protein accessionYP_001943997 
Protein GI189347468 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTTT CAAAAATCGA GATTCTCGGG TTCAAGAGTT TCGCTCACCG GGTCAGGATA 
AGCTTCGACA AAGGCCTTAC GGCAATTGTC GGACCGAACG GCTGCGGCAA AACCAACGTG
GTGGACGCCA TACGCTGGGT GCTCGGAGAA CAGCGCACCA CCCTGCTCCG TTCGGCAAAA
ATGGAAAACA TCATTTTCAA CGGCTCGAAA AACCTTAAAC CGCTCAGTCT GACGGAAGTC
TCGATCACCA TCGAGAATAC CAGAAACGTC CTGCCGACCG AATACACCGA AGTAACCGTT
ACCCGGAGGC TTTACAGGAA CGGAGAGAGC GACTACCTGC TCAACCAGGT TCCCTGCCGT
CTGAAGGATA TTCTCGATCT TTTTACCGAT ACGGGAATGG GAAGCGATGC CTATTCGGTA
ATAGAGCTGA AAATGATCGA AGAGATCATC AGCAATAAAA GCGAAGAGAG GTTGAAGCTT
TTTGAAGAGG CGGCAGGAAT CACGCGCTAC AAGCAGCGCA GAAAACAGAC CTTCAAACAG
CTTGAAAGCG CTTCGAGAGA TCTGGCCAGA GTGGACGACG TCATTGCCGA AGTGGAAAAA
AAAGTAAGAA GCCTGAAGCT GCAGGTAAAA AAGGCCGAAA AACTCAGGGA ACTGAAAAGC
GAGATCAGAA CGACCGATCT CCTGCTGGCC GGCCTTACCC TGCATGATGA GCTCGAAAAA
CTCGACCCCC TGAAAAAACA GATCGAACAT GAAGAGTGCC TCTGTCATGA ACTGGCGGCA
ACAATAGCCG GGCGCGAGAG CGAACTGCAG GATGCTGAAC TGCTGCAGCT CCGCCATGAA
GAGGAGCTTT CGGCCTCGCA GAAAGCGCTG AACGGAATCA GCGCGGTGAT TCATGACCTT
GAAAAAAACC TGCTGCTGCA TGAAGAGCAG CAAAAAAGCC TTTTCGCAGC AATAAACAGC
ATCAGAATTA CGCTGAAGGA GAAACAAGAG AAAATTCTCA TGCTCGAGAA ACGAAAGGAT
GAACTGCTGG AAAGAAAAAA ACCTCTTGAA AAGAACTGTA ACGATCGTCT GGAAGAGTAC
AGAAAGCTCT CCGGAGAACA GGACCGCCTG AACCTTGAAC TGCAGGCTCA TCGATCCGGA
ATTGCCGAAA CGCGAAAGGA GATTTCGGAA CGTGAAAAAG CGCTTAATCG GCTCATTCTT
GAAAAAAACG GTCTGGAAAC CCGAAAGCAG CAGCTTCGGT CACTGGTGCA ACGAGCCGAA
AGCTCCAGGA ACGCGGCGAT GCAGAAGACC GAAGAATCGA CGATATTGCG AAAACAGCTC
GAGTCGGAAA TTTCCAGGCA GGCATCACTG CTTGAACAGG CAAGTGATGA TGAACGAAGG
CTGAAAAACA GGATCGAGGA GCTCGGCACC GCCATCGAAA TGCAGAAGGA AGAGCTGCTC
TCCCTTCGCG CTGAACGGGC AAGTGTCGAT AACCGGATTT CGCTGGCAGA TGCGGTACTT
GAAAATTTTG AAGGGCTGCC GGAGGGCATC GAATTTCTTG AAAAGCAGAA ATCTTCCGAA
GCGGATCAGG GATGTCTCGC CGACATGATT TCGCTTGATC CTGCATATCG AAAAGCGGTA
CACGCAGCGC TCGGCGAGGC TCTGAGCTAT TATGTATGCC GCTCGATCAC CGAAGCGAAA
CAGTCGATGC AACAGCTCCG TCTGTCGAAA AAAGGAAAAC TTCATTTTCT GGTTCTTGAC
CATATCGCCA GGATATCCGA TAACGAAACG CCGGTGCGGG AAGGCGGCCG ACGCATGATG
GATATCATCG GCTATCCCGA AGCGCTGTCG GCAGCTTTGA ACAATCTGCT TTTCAGGTAT
TATCTGGTTG ATACGCTCGA TACTGCCGAA AACATGTCCC GGCAGGATCC CGATGCGGTA
TTCGTGACTC CGGAAGGCGA AAAATTCAGC GGCAGAGGCC TGCTCTACGG AGGGAGTTCC
AGCAACAGCG AAGGGGTCCG GCTCGGTAAA AAAGCCGAAA GGGATCTGTT GCTGAACAGA
CACACTCTTC TGCAATCGAA AATCACCGGA ACAGAGGTTA CCCTTCGTCA GCTTCAGGAA
GAACTTGAAT CCGTAAAAAA AGAACGGCAA CGAGTGCAGA CGGAAAAACT GCAGCAGGAA
ATCCGGGTTC AGGAAAAAAA ACTTGCCCAT ATCGAAGCTG AAGAGCATGC CCTCCGGCAA
ACCATCCGGC ATGCGGAGCA GGAGGTTGCC GAACTGCTTG CCGCAGTGAC ACAGCTTGAT
TTGGATTCGG CGGCTTTCGT CCCGGAGATT ACTGAAAAAG AAAACGGGCT GCGGCTCTTG
CTGGAAAACA TTCAGCAGGA CCAGGAACGG CTGACCGGTC TCGAAACCCG GCACCACAGA
CTCAGCCACG ATGTTCAGGC ATGCCAGAGC CTCCACAGGG ACGCAGAACT CGAACTGGAA
AAGCTGCTGT TCAGCCTCAA TGCGAGCAGT CAGACCCTGC GGGCTGTTCA TGACGATATC
AGGAAACTTG AACGGGAAAC GGCAGATACC ACAGAAAAAA TCAACAGAAC GGAACTGACG
GTCACCGGGT TGAAACAACA GCTGGAAAGT CATCTTCTGA GTGCGGCCGC CGGGCAGGAA
TCCCTGGAAA AGCTTGAAAG CGTCTGCAGG GAACTGCAAT CCGGAAATCA GCAATCCCGA
ACAATCCAGA GAGAGTTGCG CAGAAAACAT GAAGTGAGTC GCGAACTGGT CGACCAGCTC
GTTCAGCAGC AGTCGCAGGC CGAACAACAG CTCGATCATC TCCTGACCTC GATTCAGGTG
CGCTACGGCT GTGAGCTGAA AACCGTCGAA CCGTCCGAAC TGCCCCATGA TTTCGACAGG
GCTTCGTCGG CAGACAGACT CGCCGTATTG CAGAAACAGC GTGAACAGTT TGGCGCGGTC
AATGAACTGG CGCTTGAAGA GTATGAGTCT GAAAAAGAGC GGCTTGATTT CCTGATCACC
CAGAAGGAGG ATCTGTTCTC TGCAGAGAGC CAGCTGCGCG ATACCATTGA AGAAATAAAC
AAAACGGCAC TGCTGAAGTT CAGGGAAACA TACGCGGCGG TGAGAAAAAA CTTCATCACC
ATATTCCACG AACTTTTTGA TCCGGAAGAC GAAGTCGACC TCCTTTGCAG CAGTACGGAA
GACCCGCTCG ATGCGCATAT AGAAATCGTC GCCAAACCGA GAGGGAAAAA GCCGTTGTCC
ATAGAGCAGC TCAGCGGAGG AGAGAAAGCA TTGACCGCCC TCTCCCTCCT GTTTGCTATC
TATCTTGTCA AACCAAGTCC CTTCTGCATT CTCGATGAAG TGGACGCTCC GCTCGATGAC
GCCAATGTTG GCCGGTTCAT TAAACTCTTG AAAAAATTTG AGAATAACAC TCAATTTATT
ATTGTTACGC ACAACAAGAA ATCCATGGCC TCCTGCCAGG CGCTGTATGG TGTAACCATG
GAAGAAGAGG GCGTATCGAA ACTGATTCCC GTTCGGCTTG AAAAAACAGG CTTTTGA
 
Protein sequence
MYLSKIEILG FKSFAHRVRI SFDKGLTAIV GPNGCGKTNV VDAIRWVLGE QRTTLLRSAK 
MENIIFNGSK NLKPLSLTEV SITIENTRNV LPTEYTEVTV TRRLYRNGES DYLLNQVPCR
LKDILDLFTD TGMGSDAYSV IELKMIEEII SNKSEERLKL FEEAAGITRY KQRRKQTFKQ
LESASRDLAR VDDVIAEVEK KVRSLKLQVK KAEKLRELKS EIRTTDLLLA GLTLHDELEK
LDPLKKQIEH EECLCHELAA TIAGRESELQ DAELLQLRHE EELSASQKAL NGISAVIHDL
EKNLLLHEEQ QKSLFAAINS IRITLKEKQE KILMLEKRKD ELLERKKPLE KNCNDRLEEY
RKLSGEQDRL NLELQAHRSG IAETRKEISE REKALNRLIL EKNGLETRKQ QLRSLVQRAE
SSRNAAMQKT EESTILRKQL ESEISRQASL LEQASDDERR LKNRIEELGT AIEMQKEELL
SLRAERASVD NRISLADAVL ENFEGLPEGI EFLEKQKSSE ADQGCLADMI SLDPAYRKAV
HAALGEALSY YVCRSITEAK QSMQQLRLSK KGKLHFLVLD HIARISDNET PVREGGRRMM
DIIGYPEALS AALNNLLFRY YLVDTLDTAE NMSRQDPDAV FVTPEGEKFS GRGLLYGGSS
SNSEGVRLGK KAERDLLLNR HTLLQSKITG TEVTLRQLQE ELESVKKERQ RVQTEKLQQE
IRVQEKKLAH IEAEEHALRQ TIRHAEQEVA ELLAAVTQLD LDSAAFVPEI TEKENGLRLL
LENIQQDQER LTGLETRHHR LSHDVQACQS LHRDAELELE KLLFSLNASS QTLRAVHDDI
RKLERETADT TEKINRTELT VTGLKQQLES HLLSAAAGQE SLEKLESVCR ELQSGNQQSR
TIQRELRRKH EVSRELVDQL VQQQSQAEQQ LDHLLTSIQV RYGCELKTVE PSELPHDFDR
ASSADRLAVL QKQREQFGAV NELALEEYES EKERLDFLIT QKEDLFSAES QLRDTIEEIN
KTALLKFRET YAAVRKNFIT IFHELFDPED EVDLLCSSTE DPLDAHIEIV AKPRGKKPLS
IEQLSGGEKA LTALSLLFAI YLVKPSPFCI LDEVDAPLDD ANVGRFIKLL KKFENNTQFI
IVTHNKKSMA SCQALYGVTM EEEGVSKLIP VRLEKTGF