| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1972 |
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| Symbol | |
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| ID | 6355476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2188655 |
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| End bp | 2190772 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642669570 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001943983 |
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| Protein GI | 189347454 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000839125 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC TTTGGAACGA CACGGATCTT CGGTGCTCGG TGAACGGGCA GTGCAGTGCG
GACGATATTC CTGCGGAACT TGCCGAACTG GTTTATGCCT CCCGTCTGCT TGGAAGGGAG
AGCAGTCTGG TGATGCATGG CGGCGGCAAT ACCTCGGTGA AAAGCGAGCT GCACGACATT
ATCGGTAACC GGGTTAACGT TATTTTCATC AAAGGAAGCG GTGTCGATCT GGCCGCTCTG
GACGCACACG ATTTCACACC GGTCAGGATC GAACCCCTGC AGAAGCTGCA GCATCTCTAT
GCTACCGGAG AGCGTCGCAG CGAGGAAGAT ATGCAGCGGT TTTCGACGAG GGAGTTCAAG
AACTTTCTCT ATCTGAATCT TTTCTATCTG ACCGATCACA TGGTGAACAA CTCGCTTTCA
CCTTCGATCG AAACTCTGCT GCATGCGTTT CTTCCCCACC GGTTTATTTT TCATACCCAT
TCGACAGCGC TGTTGACGCT CAGCAATCAG CCGAACGGCG CCGAACTCTG CAGGGAGGTG
CTCGGAGAGG AGTTCGGTCT TGTGCCCTAT ATCAAGCCGG GTCTCGGTCT TGCGCGTTCT
GCTGCAGAGG CATACGGAAA CGCTCCGGAC ATCAGGGGTC TTGTCCTTCA GAAACACGGT
CTTGTAACGC TGGCCGACAG TGCGGCTGCC GCCTATGACT GCATGATAGA ATGCGTTTCG
AAACTTGAAG AGCGCATAGC CAGGGCCGGA AGAAACGTTT TCCCCTCGAT CTCCCTGCCG
GAGACAGTCG CTCTGCTCGA AGATGTCGCA CCCGTTATCA GAGGCGCGGT TGTCGAAGAA
AAATCTCCCG GCACGTTCGA ATACAACCAG TTTGTGCTTG ATTTCCGTTC ATCCCCGGAT
ATACTGCAAT ACGTGAATGG TATCGAGCTT GAAGAGGTAA GCGGCAGAGG CGCCATGACG
CCGGATTTCA TTATCCGGAC AAAAAACCGG CCGCTCGTCG TTCCGGCTCC GGACGCTCTT
GATCCCGAGG GGTTCAAGAG TGCCGTTCAT GAGGCCGTCG AGCGGTATAA AGCGGAATAT
CTCGCTTATT TTCAGCGTCA GCAGCAGGCT TCGGGCATGC AGGTGACGAT GCTCGATCCG
CTTCCGAGGG TGGTTCTTGT CCCCGGGCTC GGACTGTTCG GTCTCGGAAG GACGGCCCAT
GCGGCCTCGG TCAATGCCGA TATCGCCGAA AGCACCGCCT CGGCGATTCT CGATGCGCAA
TCGGTCGGAA CCTTCGAGTC GATTACCGAG AGGGATGTTT TCAATATCGA GTACTGGGAG
ATGGAGCAGG CGAAAATGAA GAAAGTCCGT CACGATGTAT TTGCCGGCAA GGTAGCTCTC
GTTACCGGCG CGGCAAGCGG TATCGGGCTC GCTACGGCCA AGGCGTTCCG GCAGAGGGGG
GCGGAGCTGG TAATCGTCGA TCTGAACCCG GAGGCACTTG AACGTGCCTC CGCAGAGCTT
GGCGGAGGGG TACTCTCCAT AGCGTGCGAC GTTACCGACC GCAATGCGGT AAAGCGGGCC
TTTGACGCTG TCTGCCGCCG ATTCGGAGGT CTCGACATTC TTGTTTCGAA TGTAGGAGTC
GCACTGCAGG GAAGGATCGG CGACGTTGCG GACGAAGTGC TTCGCCGGAG TTTCGAATTG
AATTTCTTTT CGCATCAGTC CATTGCGCAG CAGGCGGTCA GAATCATGAA ACTGCAGGGC
ACCGGTGGCG TTCTGCTTTT CAACGTATCC AAGCAGGCGG TAAACCCCGG CCCCGATTTC
GGCCCTTACG GGTTGCCCAA AGCGGCAACG ATGTTTCTCG TGCGCCAGTA TGCGCTTGAT
CACGGACGCG ACGGCATTCG GGCCAACGGG ATCAATGCCG ACCGTATCCG TACCGGTCTT
CTGACCGATG AAATGATCAA AACCCGCTCG AAAGCCCGAG GGCTGAGCGA ACGGGAGTAC
ATGGCCGGCA ACCTGCTTCA GGTTGAGGTC ACGGCCGAAG ACGTTGCCGA GGCATTCGTG
CACCAGGCGC TTGAAACAAA AACGACCGGC TCTATCGTCA CGGTTGACGG TGGCAACATT
GCTGCCGCCC TTCGTTGA
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| Protein sequence | MQNLWNDTDL RCSVNGQCSA DDIPAELAEL VYASRLLGRE SSLVMHGGGN TSVKSELHDI
IGNRVNVIFI KGSGVDLAAL DAHDFTPVRI EPLQKLQHLY ATGERRSEED MQRFSTREFK
NFLYLNLFYL TDHMVNNSLS PSIETLLHAF LPHRFIFHTH STALLTLSNQ PNGAELCREV
LGEEFGLVPY IKPGLGLARS AAEAYGNAPD IRGLVLQKHG LVTLADSAAA AYDCMIECVS
KLEERIARAG RNVFPSISLP ETVALLEDVA PVIRGAVVEE KSPGTFEYNQ FVLDFRSSPD
ILQYVNGIEL EEVSGRGAMT PDFIIRTKNR PLVVPAPDAL DPEGFKSAVH EAVERYKAEY
LAYFQRQQQA SGMQVTMLDP LPRVVLVPGL GLFGLGRTAH AASVNADIAE STASAILDAQ
SVGTFESITE RDVFNIEYWE MEQAKMKKVR HDVFAGKVAL VTGAASGIGL ATAKAFRQRG
AELVIVDLNP EALERASAEL GGGVLSIACD VTDRNAVKRA FDAVCRRFGG LDILVSNVGV
ALQGRIGDVA DEVLRRSFEL NFFSHQSIAQ QAVRIMKLQG TGGVLLFNVS KQAVNPGPDF
GPYGLPKAAT MFLVRQYALD HGRDGIRANG INADRIRTGL LTDEMIKTRS KARGLSEREY
MAGNLLQVEV TAEDVAEAFV HQALETKTTG SIVTVDGGNI AAALR
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