Gene Clim_1964 details

Gene Information

• Locus tag: Clim_1964
• ID: 6355019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 2178129
• End bp: 2180027
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642669562
• Product: DNA primase
• Protein accession: YP_001943975
• Protein GI: 189347446
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.985881
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCGC AAAGCGTTAT TGATGATATC CGTCAGCGAG CCGACATTGT CGATGTCATT 
TCGGATTATG TCAAACTGCA GCCGTCCGGT CGCAACTTCA AGGCTCTCTC TCCGTTTACC 
CAGGAAAAAA CACCGTCATT CGTTGTTTCG CCGGACAAGC AGATCTACAA GTGCTTTTCG 
ACGGGCAAGG GCGGCAACGT GTTTTCGTTT ATCATGGAAA TGGAACGGGT ACAGTTTCCT 
GAAGCGGTGG AAATCGCAGC CAAACGTGCG GGCGTCGATA TCAGCAGGTT CACGGCAAAA 
GAGAAAGGCG CAGGTCATGA AGAGGACAGC AGAACAGCGA CGCTGCGATG GGCTGCCCGA 
CAGTTTCACC ATACCCTTAT GGGCGAGTCC GGAAAAAAAG GACTTGCTTA CCTTGCCGCA 
GAGCGTGGAC TTACGGCACA AACCATAACA TCGTTCGGGC TGGGCTATGC CCCTGAATCG 
TGGGAGCACC TGCTTGGCGA AGCGCAGCGG GCAGGCATTG CGGAGAAACA GCTTGCCGAG 
CTCGGCCTCG TCACGGCAAA CCGGCAGCGG AACTCCGTGT ACGACGCGTT CCGAAACAGG 
GTCATTTTCC CCATATTTTC CGTTGGGGGC CAGGTCGTCG GTTTTGGAGG CCGAACACTG 
CGAAACGATC CCGATACGCC GAAGTATCTG AACTCTCCGG AAAGCAGCAT GTTTGAAAAA 
TCGAAACTGC TTTATGGCAT GCATGCAGCA AAACAGGAGA TCCGGAAAAC GGAAACCGCA 
ATTCTTGTGG AGGGCTATAT GGATGTACTG GCCCTGCATC AGGCGGGAAT CACCAATGCC 
GTCGCATCGT GCGGCACAGC ACTTACCCGG CACCAGGCAA AAATCATGCA GCGCTACACC 
TCGAGGGTGC TGTTTATCTA TGATGCCGAT CCTGCCGGAA GAAAATCCAT GATGAGCGGG 
ATCGACATCC TGCTTTCGGA AGGAATCGTT CCGTACGTCG TCATGCTGCC TCACGGCGAT 
GATCCGGACA GTTTCGTCCG GCGTGAAGGA CGTGAGGCAT TTATGCGATA TACCGAAGAA 
AACCGTCTCG GTTTTCTCGA TTTTCAAATC CGTTTTTTCA CGGAATCAGG CGATTTCGAC 
CAGCCGGACA CCAAAGCGAA AGCCATCAGC GCGATGGGCA GAACCATCGC CCTCATTCCG 
GACCGGGTAC GACGGGAACT CTATATGCAG GAGCTTTCGG GAAAACTTTC CATCAGTATG 
CAGGCACTGC GCGAATCCGC AGGAAAAGAG AGGGCAGTAA AGGAACCATA TACTTCGAAA 
GAAGAGCGTA CCGCAACGGC ACAATTCAGA ACTCAGGATA CGCGTTCGAG GGTTACCATA 
CTGGAAAAGA CCTTTCTGAA AGCCCTTCTG GAAAGCGCAC TGTATGGAAA CGGCGTGATC 
GAATTCGCCG CATCGCACGA GGAGATGCTG GAACTGCCGC ATCCGGCAGC CAGGGAGATC 
CTTGCCCATA TGATCGAGAG GTACCGCAAC AGTTCCGGCG ATCCCGATGA ACGGATCGAT 
GTGGTAACGG AAATCAGCCG GTTCAAATCA ACGGAAGCCA GGGATCTTGC TTCCGGGCTT 
CTGATCGATC AACCGGTAAG CAGCAGATGG CATGAGCAGT CGGATGCGGA AAGGGAGCAT 
GCCCGGCGCT GCCTGACGGC ATTTCTCGAT GCGTTTAAAA ACATCATCCT TGAACCGCTT 
GTCCGGCGAA AAGAAACGGT TACGGAAAAG CTGCGCAGAG AGGACGACAA CAACAGTGCC 
GTCGAACTGC AGAAAGAGAT AATAGAAATC AACGCAACCA TCAAAAAAAC ATCGGCCGAT 
CTGGGAGCCA TGATCACCGG TATTCTCGAA GAGCGGTGA 

 

Protein sequence

MIPQSVIDDI RQRADIVDVI SDYVKLQPSG RNFKALSPFT QEKTPSFVVS PDKQIYKCFS 
TGKGGNVFSF IMEMERVQFP EAVEIAAKRA GVDISRFTAK EKGAGHEEDS RTATLRWAAR 
QFHHTLMGES GKKGLAYLAA ERGLTAQTIT SFGLGYAPES WEHLLGEAQR AGIAEKQLAE 
LGLVTANRQR NSVYDAFRNR VIFPIFSVGG QVVGFGGRTL RNDPDTPKYL NSPESSMFEK 
SKLLYGMHAA KQEIRKTETA ILVEGYMDVL ALHQAGITNA VASCGTALTR HQAKIMQRYT 
SRVLFIYDAD PAGRKSMMSG IDILLSEGIV PYVVMLPHGD DPDSFVRREG REAFMRYTEE 
NRLGFLDFQI RFFTESGDFD QPDTKAKAIS AMGRTIALIP DRVRRELYMQ ELSGKLSISM 
QALRESAGKE RAVKEPYTSK EERTATAQFR TQDTRSRVTI LEKTFLKALL ESALYGNGVI 
EFAASHEEML ELPHPAAREI LAHMIERYRN SSGDPDERID VVTEISRFKS TEARDLASGL 
LIDQPVSSRW HEQSDAEREH ARRCLTAFLD AFKNIILEPL VRRKETVTEK LRREDDNNSA 
VELQKEIIEI NATIKKTSAD LGAMITGILE ER