| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1952 |
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| Symbol | |
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| ID | 6355007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2168642 |
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| End bp | 2170063 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642669550 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001943963 |
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| Protein GI | 189347434 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0253288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCA ATCTCGCAGT AAAGTACAGC AATCCCGGTC CGCGTTATAC AAGCTATCCC
ACCATTCCAT CCTGGAGCAG CGACGGCGTA ACCCAGGAGC AGTGGAAAGA GGCTATGGTG
AAAGGTTTCA ACGACAGTAA CGAGACCACC GGCATAAGCA TGTACATCCA TATTCCTTAC
TGCGAGAACT ACTGTTATTT CTGCGGATGC AATGCTCATC GCACTCAGGA TCACTCGTTC
GAGGAACCCT ATCTCGAAGC GCTCCAGAAA GAGTGGCAGA TGTACCTCGA TGTATTTCCC
GGAACTCTCA ATGTAAAGGA ACTGCATATC GGCGGCGGTA CTCCGACCTT TTTCAGCCCG
GAAAACCTCG CCCGTCTTGT CGAGAATCTC TTCAGGACCG TCAATCGCAT GGACAACTAC
ATGTTCAGTT TCGAAACCAA TCCCCGTTCC ACCTCCAAAG AGCACCTTGA AGCGCTCTAC
CGTGTCGGTT TCCGGAGAAT GAGTTTCGGC ATCCAGGACT TCGATCCGGT TGTGCAGCAG
GAGATCAATC GTCCCCAGTC CTTCGAACTG GTCAAGGAGA AGGTTGACCT TGCCCGTCAG
ATCGGCTTTA CCTCTGTGAA CTTCGATCTT GTGTACGGTC TTCCCAAGCA GACGCTTGCC
ACCATAACCG ACACCATCGA CAAGGTCATG CAGCTCCGGC CCGACCGCCT CGCGTTCTAT
GCCTACGGTC ACAACCCTCA CATGTACGAA GGACAGCGCA AATTCAAGGA AGAGGACCTT
CCGGTCGGCG ACGTCAAACA GGAGCTTTAC GACAAGGGGC GTGCCATGCT TGAGTCCATC
GGCTATCATG AGATAGGCAT GGATCATTTC GCGCTTGAGG GCGATTCGCT CTACCTTGCA
GCAAAAGACG GCTCCCTGCA CCGGAACTTC ATGGGCTATA CCGAAAACAC AACGCAGATG
ATGATCGCCC TCGGCGCATC GTCGATCAGC GATACCTGGT ACGCCTTTGC GCAGAACGAA
CGCGGTGATC AGAAATATAT CGAAGAGATC AATAAAGGCC GTTTCCCGAT TCTTCGCGGC
CATCTGCTTA CCGATGAAGA TCTTGTGCTC AGACGCCACA TCCTCAATCT CATGTGCCGT
CAGGAGACGT CATGGGAAGA TCCGAAAATG TACACCGAAG AGCTCGACAT CGCGCGTTAC
CGCCTTGAGG ATATGGAGAA CGACGGTTTG GTGGTGCTTC TGGAAAACGG CGTGCGGGTA
ACCGAAATCG GCATTCCTTT TCTCCGGAAC ATCTGTATGG CTTTCGATGC GCGCCTCTGG
CGTTCCGACA GCCTTTCGAA AGCGTACAAC GTATCCAGGG ATATACAGAA AGAGTATATC
GAAAAGGCAC GTCAGGCCAA AGCCCAGCAG CAGGTCAGTT GA
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| Protein sequence | MATNLAVKYS NPGPRYTSYP TIPSWSSDGV TQEQWKEAMV KGFNDSNETT GISMYIHIPY
CENYCYFCGC NAHRTQDHSF EEPYLEALQK EWQMYLDVFP GTLNVKELHI GGGTPTFFSP
ENLARLVENL FRTVNRMDNY MFSFETNPRS TSKEHLEALY RVGFRRMSFG IQDFDPVVQQ
EINRPQSFEL VKEKVDLARQ IGFTSVNFDL VYGLPKQTLA TITDTIDKVM QLRPDRLAFY
AYGHNPHMYE GQRKFKEEDL PVGDVKQELY DKGRAMLESI GYHEIGMDHF ALEGDSLYLA
AKDGSLHRNF MGYTENTTQM MIALGASSIS DTWYAFAQNE RGDQKYIEEI NKGRFPILRG
HLLTDEDLVL RRHILNLMCR QETSWEDPKM YTEELDIARY RLEDMENDGL VVLLENGVRV
TEIGIPFLRN ICMAFDARLW RSDSLSKAYN VSRDIQKEYI EKARQAKAQQ QVS
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