Gene Clim_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1890 
Symbol 
ID6354944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2094889 
End bp2095725 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content54% 
IMG OID642669490 
ProductIntegrase catalytic region 
Protein accessionYP_001943904 
Protein GI189347375 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCCAGG AAATCAGGGA AGAGATCGTC GCAGTCTGCA ATGAACAGCG ATTCCGGGAT 
CAGACGCCGT ATGAAATCGT CCCGCAACTC CTGACAGAAG GCCGGTATCT GGCCTCTGAA
AGCACGATCT ACCGTATCCT GAGGGAAAGG GACCTGCTGC ACCATAGGAG CGAACTGCGC
GTACGCCATC GCCACTCCAA GCCGCCGGAA CGACGGGCGA CAGGGTCGGA TCAGGTGTAC
ACGTGGGACA TCACCTACAT GGGCCGTACG ATAAGAGGTC TCTACTATTA CGCTTACGTC
GTGACGGACA TCTTTGACAA GTCCATCGTT GGATGGGCTG TGCATGCAGA AGAGAGTGAA
ACACACAGCC GGGCACTGTT CGAGCGGATC CTGAAAGGGC GTCGTATAAG CCTGAAAGCG
CTCCATGCCG ATAACGGACA CCCGATGAAA GGGGTTTCGC TTAAGGCGCT CCTGGTAGAC
CTGAAAGTAG CTGTCTCGCA CAGCAGGCCA CGGACCAGTA ATGACAACCC GTATATCGAA
TCGCTGTTCA AGACGATGAA GTACCACGTC ACCTATCCGA AAGCCTTTGA AACACTGGAG
GATGCACGGC AATGGATGGG AGCGTTTGTG AACTGGTACA ACACCGAACA CATGCATTCT
TCGATTGGGT ATGTAACGCC GCATCAGATG CGGTACGGTC AGGCAAAAGC CATTTTTGAA
CAGCGAAATG GAACACTTCA GCTTGCTCGG GAGATACATC CCGAACGTTG GGGATCAAGA
CCGGCAAGAG CATGGAACAT TAACCGGGAA GTGGTGCTGA ACCCGGACAA AAAGTGA
 
Protein sequence
MPQEIREEIV AVCNEQRFRD QTPYEIVPQL LTEGRYLASE STIYRILRER DLLHHRSELR 
VRHRHSKPPE RRATGSDQVY TWDITYMGRT IRGLYYYAYV VTDIFDKSIV GWAVHAEESE
THSRALFERI LKGRRISLKA LHADNGHPMK GVSLKALLVD LKVAVSHSRP RTSNDNPYIE
SLFKTMKYHV TYPKAFETLE DARQWMGAFV NWYNTEHMHS SIGYVTPHQM RYGQAKAIFE
QRNGTLQLAR EIHPERWGSR PARAWNINRE VVLNPDKK