Gene Clim_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1885 
Symbol 
ID6355226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2090429 
End bp2090881 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content44% 
IMG OID642669485 
Producthypothetical protein 
Protein accessionYP_001943899 
Protein GI189347370 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTTG ACACCTTGCA AAACATCGAA ACCTATAAGA ACCTCTCAGA GGATATCTAT 
GCAGGTCTGA AGTTTCTTTC CGAGCTAAAG CCGGATATTG AATTGGGCGA ATACCACATT 
AATGAGCGAG TTAAAGCCAT TGTCAGTGAG TATGAAACCA TCGAGGAATT CACCCGTGGT 
TATGAGGCAC ACAAACATGT GGTCGATATT CAGTATCCGA TCAAAGGCCT CGAACGTGTG 
AAGTGGTCTA ATATTGTCGG AATGGATGTG AATATCTCTT ACGATGAGAA AAAGGATCGG 
ACCTTCTTCA AAAATCCCTT TCCGCAGATG ACCCACGTTG ATATCGGGAA CGGTGTATTT 
GCCATCATGT TCCCGCAGGA CGGACATGGT CCTCAGCACT ATGTCAGCCA GCCGGAAATG 
ATCAAGAAGG TTACTGTCAA AGTTTCTATT TAA
 
Protein sequence
MIVDTLQNIE TYKNLSEDIY AGLKFLSELK PDIELGEYHI NERVKAIVSE YETIEEFTRG 
YEAHKHVVDI QYPIKGLERV KWSNIVGMDV NISYDEKKDR TFFKNPFPQM THVDIGNGVF 
AIMFPQDGHG PQHYVSQPEM IKKVTVKVSI