| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1855 |
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| Symbol | |
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| ID | 6355196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2036448 |
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| End bp | 2038451 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642669459 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001943873 |
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| Protein GI | 189347344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.329592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAA TCAGGGCGTT TTTTTCGGCA TTGAACAGAT GCGTTGTGTT TTTCGGCGTT
CTTGCCGCTA TTGTTTTGTT TTCGTTTCCG CTTTTTTCCG CTGAAGTGCA GCAGGACGGA
ACGGTGCAGT CCGGCGCCGT TTCAGGAGGA TCGGTTCTGC TGAAGTCGCA AAATGAGGCG
CAGCAGGCGG TTTGGGAACC CTCGGGAATG GATTCGCCCC CGCCTTCGCT TGTTTTGCCG
CCCGAACGGG TTCTGGACAG CGTTCCCATT CGCTCTCCCG CAAAGGTCAG CGCGAATGCA
GAGCAGAGTG AAACGGATGG AAAAGGGCGT TCTGCAAGGG TTTCGAGGAA AAAACAGGTT
CGTGACAGCT TGAGGGTTGC TGCTCTGAAG CGGGCAGAGG TTCTTAAGCA AATGAAGAGA
GCTGCTGAAA AGAAAGTGCT CGACAGTCTT GAAACTGCAG CCAGGACACT GCGTATTCAG
AACAGTCTGA GGCGCGAGTC GGCAATGGTG CGGTATCGTG ACAGTGTGCG TCTTGTTTTA
GCGCATGAGC GGACCCTTGA CAGCCTGAAT GCTATCCGCA TGAAACGGAA TCGTTCATCG
GTCACAAACC GTTCGGCTCG CAAGAAGCAG TATAGCGACA GCCTTAAGAC AGCCTCAGCG
ATTGCAGGAG GTGACAGGGA GAAGCCGAAG ATGGAGCTTG TTGATAGTCA GCCGCTGCCG
GGCAGGCTTC CCGCCGATTC GGTTTTGCTT AAAAGTGGTC CGGGCAGGCC GGTTTCCGGA
CAACCGGCGT TGCAATCTCT TCAGCTTAAG CCTGTGCCGC AGCAGAAAAC GGTTTCGACG
GCTGGAAGCC GGAGCGACAG CCTTTCTGCC GCAGCGTTGC TGTATTATCG GCAGGGGAGT
TACGATCGGG CTCTTCCTGT CGCCAATCAG GCACTTTTTC TTTCCCGAAA GAGGTCGGGT
TTGAATTCGT CAACTGAATT ACCGTCGCTT GTTCTGATTG CCGATATCTA TCTGGCGGAA
AAAAAGTACC GGCAGGCGAT GCCTTTCTAT CTGCGGGCGC TTGCTATCAG CGAAAAAATG
CCTGCGCAGG ATTATTCGGT TACAGCCGGT ATTCTGTACA GTCTCGGTTT GCTTCATGCC
GCCGATGGCT CGGAGTCCAG GGCGGATGAG TATTACCGGA AAGCTCTTGC GCTCAGGGAA
AAAACCGAGG GTCCGGAGGG CGAAGGCGTT GCGGAAACGC TTGCTGCCAT GGGAAATCTG
TACAATCGTC AGGGGAAGAG CGATATCGCC ATGATGTATT ACGTCCGGGC ATTGTCGATC
CGCGAAAAGC TCGATGGTAC GGGGGCTTCA TCCGCTCCGA TTCTTCTTAA TATGGCGGCT
TTGTACAATC AGACCGGATA TTACGATATG GCGGTTCAGC TTTTTCAGCG TGCGCTCATG
ATCAATGAGA GAGTCAGGGG TCAGTTTCAT CCCGATGTTG CCGTTTCGCT CAACGGACTT
GCCATGATTT CTCTGGTGCA GCAGCGATAT ACGGAGGCGG AACTGCTTTT TCAGCGCGGG
CTCGATGTTC AGGAGAGGGC ATTTGGTCCC GATCATGCCG AGGTTGCCCT TACTCTTCAG
AGTCTCGCTT CGGTCAAAAG GCTGTTGCAG CGGTTTGACG ATGCGGAGCG GCTGATGAAA
CGATCTCTGG CCATAACGGA AAAGCATTTT CCGCCGGGAC ACCGCAATAC CGGAGCGGCA
TTGAATTCGC TTGCCCTTAT TTATGAAGCG AAGGGCGATT ATGCTGCGGC AGAGGCTTTG
TTCAGAAAAT CTCTTGCCGT GTCGGAAAAG CGTGTCGGGG GCAATCGCTT TGATGCAGCT
CAGGTGCTCG AAAATATGTC CGGCATGTAT CTGAAATCAG GGAGGCAGAA GGAGGCTGAA
GAGTATGCGA AGAGAGCGAT GCGGCTGCGG AACCTGCCGG GGGAGAGGGG AGATGAAGGA
ACGCCGGTTT TCAGAAAGAA ATAA
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| Protein sequence | MHEIRAFFSA LNRCVVFFGV LAAIVLFSFP LFSAEVQQDG TVQSGAVSGG SVLLKSQNEA
QQAVWEPSGM DSPPPSLVLP PERVLDSVPI RSPAKVSANA EQSETDGKGR SARVSRKKQV
RDSLRVAALK RAEVLKQMKR AAEKKVLDSL ETAARTLRIQ NSLRRESAMV RYRDSVRLVL
AHERTLDSLN AIRMKRNRSS VTNRSARKKQ YSDSLKTASA IAGGDREKPK MELVDSQPLP
GRLPADSVLL KSGPGRPVSG QPALQSLQLK PVPQQKTVST AGSRSDSLSA AALLYYRQGS
YDRALPVANQ ALFLSRKRSG LNSSTELPSL VLIADIYLAE KKYRQAMPFY LRALAISEKM
PAQDYSVTAG ILYSLGLLHA ADGSESRADE YYRKALALRE KTEGPEGEGV AETLAAMGNL
YNRQGKSDIA MMYYVRALSI REKLDGTGAS SAPILLNMAA LYNQTGYYDM AVQLFQRALM
INERVRGQFH PDVAVSLNGL AMISLVQQRY TEAELLFQRG LDVQERAFGP DHAEVALTLQ
SLASVKRLLQ RFDDAERLMK RSLAITEKHF PPGHRNTGAA LNSLALIYEA KGDYAAAEAL
FRKSLAVSEK RVGGNRFDAA QVLENMSGMY LKSGRQKEAE EYAKRAMRLR NLPGERGDEG
TPVFRKK
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