Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1827 |
Symbol | |
ID | 6355167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 2003333 |
End bp | 2004253 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642669430 |
Product | tyrosine recombinase XerD |
Protein accession | YP_001943845 |
Protein GI | 189347316 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGC ACGATCTCGC CGAACCCTAC AGGAGAACGC TCGAAAACTT CCTGAATCAC CTCTCGGTAG AGAGAAACTT CTCTGTAAAT ACCCGCGAAT CATACAGAAA CGACCTGAAG CGATATCTGC TCTTCATGCA GGACGAAAAC AAAGCGATCG GCGCCGTCGA AACTGCGGAT ATCCGAAAAT TTATCTCGGA ACTGCATGCG ACCGGGCTCG AAGCAAGCAC TCTGGGCAGA AACATCTCCG CAATCCGTTC GCTGCACAAA TTTCTCCTGA TCGAACGAAC GCTTGAAACC AATCCTGCCG AAACCATACA GCAGCCGAAA CTGGCAAAAA ACCTTCCTGA CGTGCTCAGC CTGAGCGAAG TCATGAGTCT GCTCGAAGCC CCCCTGCAGC AGAACCCGCC AGGCAAATTC CTGCTGCGCG ACAAAGCCAT TCTTGAATTC CTTTATGCCG CTGGAGTCCG TGTCAGTGAA CTGACCGCCC TGCAGCAGCA ACACCTCTAC TTCGATGCCG GATTTGTAAG AATATTGGGA AAAGGATCGA AAGAGAGACT CGTACCGGTA GGAAATGCCG CCATAGAGGC GATAACGCAA TATCAGAATC AGTTGCGAAT CGGAATGGTC ACAAAAGAGT CGGAGGACTG CCTTTTTCTC AATGCAAGAG GGAAAAAACT CTCGAGAATG GCCGTCTATC TTATGGTGAG AGAGTATGCC GCTCTTGCCG GAATCCGAAA AAACATCAGC CCGCACACCC TCCGGCACAC CTTTGCCACC CATCTGCTCG AAGGAGGAGC AGACCTCCGT GCCGTTCAGG AAATGCTCGG CCACAGCTCC ATTCTTGCAA CCCAGATCTA CACCCACATC GACCGCTCAT TCATCAGGGA AGTACACAAA ACATTCCATC CGAGAGCGTA A
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Protein sequence | MNMHDLAEPY RRTLENFLNH LSVERNFSVN TRESYRNDLK RYLLFMQDEN KAIGAVETAD IRKFISELHA TGLEASTLGR NISAIRSLHK FLLIERTLET NPAETIQQPK LAKNLPDVLS LSEVMSLLEA PLQQNPPGKF LLRDKAILEF LYAAGVRVSE LTALQQQHLY FDAGFVRILG KGSKERLVPV GNAAIEAITQ YQNQLRIGMV TKESEDCLFL NARGKKLSRM AVYLMVREYA ALAGIRKNIS PHTLRHTFAT HLLEGGADLR AVQEMLGHSS ILATQIYTHI DRSFIREVHK TFHPRA
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