Gene Clim_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1800 
Symbol 
ID6354629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1978936 
End bp1979619 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content51% 
IMG OID642669403 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_001943818 
Protein GI189347289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGA ACCAGATGCA AAAAGAGTCT AAACAGGAAC CGATGAAACC TGATGCCGCC 
GATAATCTCC TCTATATTAT CATCAAATAT AAAAACGTAC TGATCGGCGC CCTGGTTCTC 
ATCATTGCAC TCGGCGGAGG AACCGCCTTC TGGCTGAACC AGCAGAAAGC AGCAGAGCAG 
GAAGCCTCGA TGCAGCTTTC AAAAATAGCT CCGCTTCTCG ACCGCGGAGA GTACCGCAAG 
GCTATTGACG GGACATCCGG CAATGCAGGC CTGAAAAGCA TCTCCGGAAA ACATGGAAGC 
ACTCCAAGCG GCAGCATGGC ATCACTGCTG CTGGCAAACG CATACTACCT GCTCGGTCAA 
CCCGACTCCG CACTCGCAGT TTACGACGGT ATTTCGATAA AAAACAAGGA TCTTTCAGCC 
GCTGTCCTTG CCGGTACCGG AGCTTGCCAC GCGAAAAAGA AAGCGTTTGC GCAAGCAGCT 
GCAGCGTATG AAAAAGCTGC GGAAAAAGCC GAAAACAAAG CACTTAAAGC TCAATACGCC 
TTCAATGCCG CCGACAACTA TCTCGATAGC GGAAAGCTTG AAAAAGCGCT TGAACTCTAT 
AAAAAAATCG TTGCAGACTA CCCCGGATCA ACCGGAGCGG CACTTGCCCA GAGAACCCTC 
TGGCAGCTGT CGGGAAGCCG CTGA
 
Protein sequence
MNMNQMQKES KQEPMKPDAA DNLLYIIIKY KNVLIGALVL IIALGGGTAF WLNQQKAAEQ 
EASMQLSKIA PLLDRGEYRK AIDGTSGNAG LKSISGKHGS TPSGSMASLL LANAYYLLGQ 
PDSALAVYDG ISIKNKDLSA AVLAGTGACH AKKKAFAQAA AAYEKAAEKA ENKALKAQYA 
FNAADNYLDS GKLEKALELY KKIVADYPGS TGAALAQRTL WQLSGSR