| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1764 |
|---|
| Symbol | |
|---|
| ID | 6354592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1939449 |
|---|
| End bp | 1940609 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642669366 |
|---|
| Product | ATPase (AAA+ superfamily)-like protein |
|---|
| Protein accession | YP_001943782 |
|---|
| Protein GI | 189347253 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCCAC GAAATCTTGC ATCTGCCCTG AAGTCACGCG CTGCCCGGTA TCCTGTCGTT
ACCGTAACCG GTCCGAGACA GTCGGGCAAG ACAACCCTGT GCAGAGAGAG TTTTCCTGAA
AAACCGTACA GTAACCTGGA ACGCCCCGAC ACACGAGAGT TCGCCCTGTC CGATCCTGCC
GGGTATCTGT CGCAGTTTCC AGAGGGAGCG GTGCTCGATG AAATCCAGAG GGTTCCGGAG
CTGCTTTCGT GGATTCAGGT GCGTGTCGAT GAACACAACA TGGCAGGTGA ATTCATACTT
ACCGGCAGCC ATCAGTTCGA ACTGAACCGT CGTATCAGCC AGTCGCTTGC CGGAAGGACG
GCCCTTCTCA ATCTCCTCCC GCTTTCGATT GCCGAGCTGC ATGCATACGG AGCGCCTTCC
GGCATCAACC GCCTGCTCCA TGCCGGAGGC TATCCCCGTA TTCATGCCGA TCATCTCGAT
CCGGCAGTGG CTCTCGGCGA CTATTTTGCA ACCTACGTCG AGCGGGACCT GCAGGAACTC
ATTCACCTCC GGCACATCCG GGAATTCGAA CTGTTCGTTC GTCTGGCAGC AGGCAGAACC
GGTCAACTGC TCAACCTGCA CAGCCTTGCC GGAGACGCAG GTGTTTCAAG CCAGACTGCA
AGAACGTGGA TCTCTTTGCT GGAAGCCTCG TTCATTGTTT TCCTGCTCCC CCCATGGTTC
GCCAATATCG GCAAACGGTT AACCAGGTCG CCGAAACTCT ATTTCTGCGA CGTCGGACTT
GCCTCATGGC TGCTGGGAAT CCGCGAAGAG TCGCATCTCG ATGTTCACCC GCTGAAAGGA
CAGCTCTTCG AAAACCTCGT GGTGCTTGAA ATCATGAAGC AGTACCTCAA TCAGGGAAAG
CATCCGCAAC TCCATTTTTA TCGCGACAGC AGCGGTCTGG AAACCGATCT GCTGTTCGAG
GAACAGGACG GCATTGTCCT CACGGAAATC AAATCCGGTC GGACTGTTTC CGGAGAGGCA
TTCTCATTGC TGCATAAAAC CCGTGAAATC CTCGGAGAAC GGGTAAAAAA GATGAACCTT
GTCTACGGCG GCACGGAACA CCAGCACCGC AGCGACATAG AGGTGCGGGG ATACCTCGAA
GCGTCCGGGA TTGTTAAGTA G
|
|---|
| Protein sequence | MIPRNLASAL KSRAARYPVV TVTGPRQSGK TTLCRESFPE KPYSNLERPD TREFALSDPA
GYLSQFPEGA VLDEIQRVPE LLSWIQVRVD EHNMAGEFIL TGSHQFELNR RISQSLAGRT
ALLNLLPLSI AELHAYGAPS GINRLLHAGG YPRIHADHLD PAVALGDYFA TYVERDLQEL
IHLRHIREFE LFVRLAAGRT GQLLNLHSLA GDAGVSSQTA RTWISLLEAS FIVFLLPPWF
ANIGKRLTRS PKLYFCDVGL ASWLLGIREE SHLDVHPLKG QLFENLVVLE IMKQYLNQGK
HPQLHFYRDS SGLETDLLFE EQDGIVLTEI KSGRTVSGEA FSLLHKTREI LGERVKKMNL
VYGGTEHQHR SDIEVRGYLE ASGIVK
|
|---|
| |