Gene Clim_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1754 
Symbol 
ID6354582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1930279 
End bp1930920 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID642669358 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001943774 
Protein GI189347245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCG TTTTCTTACA CGGCTTTTCA ACAGGATTGT TTCTGCAGCT CGCTGTAGGG 
CCGGTGTTTT TTCTTGTTCT GCAGATTACT CTGCAACGAA CGCCGCTTGA TGGATTCTGT 
TCGGTGGCTG CAGTGACGAT GGTGGACTAT TTTTATATTT TTCTTGCGGT TGCCGGTGCG 
GGAAAGCTGA TCGACAAGAG CGGGGCAGTT CCTGTTTTCA GGTTGATCGG CGTTGGGGTT 
CTCTTGATTT TCGGGATTAT CATGCTTGTA TCGGCGATGA GCATGACTTC CGAATCGGTT 
TTTCTGCAGG GGGCCCCTGA TTACCGGTCG AGTTTTTTGT CCGCTTTTTT TCTGACTATT 
ACGAGTCCCT TGACCATTGT ATTCTGGAGC GGCCTTTTTG CCGCAAAAGC CGTCGAGCAG 
GGTTATACGA AACACATGCT CGCGATTTTC GCTCTTTCCG CCGGTTTTGC GACCTTTTTT 
TTCCTTGGCG GGAGTGTCCT GATCATTTCG ATTCTCAAGG TTTCGATGCC GTTTCTGGTC 
GTTAAAGTCC TGAATGTTTC TGTAGGAGTT GTCGTCTTGC TCTATGGCGC AAGGAAAGCG 
ATGGTTGTTT CAGGCACCTG GAAACCGGGA AGAGGCGAGT GA
 
Protein sequence
MIRVFLHGFS TGLFLQLAVG PVFFLVLQIT LQRTPLDGFC SVAAVTMVDY FYIFLAVAGA 
GKLIDKSGAV PVFRLIGVGV LLIFGIIMLV SAMSMTSESV FLQGAPDYRS SFLSAFFLTI 
TSPLTIVFWS GLFAAKAVEQ GYTKHMLAIF ALSAGFATFF FLGGSVLIIS ILKVSMPFLV 
VKVLNVSVGV VVLLYGARKA MVVSGTWKPG RGE