Gene Clim_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1728 
Symbol 
ID6354556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1898919 
End bp1899344 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content52% 
IMG OID642669332 
Productprotein of unknown function UPF0047 
Protein accessionYP_001943748 
Protein GI189347219 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA TAACAAAAAC CATCACGACA CCAACCCTGA CGCCTGTCGA GATTATCGAT 
ATCACTCCTG AAATCAGAAC TGCTGCAGCA GAATCAGGAC TTCAGGCGGG AACGGTCACC
GTCATCAGCC AGCATACAAC GGCATTCATC AATATCAACG AAAAAGAGAA CTGCCTGCTT
GAAGACATGG TAACCTTCCT GAAACGTCTC GTTCCCCGCG ATGGCAACTA CAGCCACAAT
ATCAGCCCAC TCGACGGAAG GGACAATGCC CACTCGCACC TTCTGGGGCT CTTCATGAAC
ACCTCCGAAA CCATACCGTT TTCCAGGGGG GAACTGCTGC TCGGACGGTG GCAATCGGTT
TTTTTTATCG AACTCGACGG CCCAAGGCCA AGCCGCTCGA TTCTCCTCCA GTTCTCCGGT
ATCTGA
 
Protein sequence
MKIITKTITT PTLTPVEIID ITPEIRTAAA ESGLQAGTVT VISQHTTAFI NINEKENCLL 
EDMVTFLKRL VPRDGNYSHN ISPLDGRDNA HSHLLGLFMN TSETIPFSRG ELLLGRWQSV
FFIELDGPRP SRSILLQFSG I