Gene Clim_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1676 
Symbol 
ID6353983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1842441 
End bp1843271 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content47% 
IMG OID642669281 
Productsignal peptidase I 
Protein accessionYP_001943697 
Protein GI189347168 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.812677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCTG AACAGGAAAA AACGGTGAAA AAACATTCGA GAGAGTGGTT TGACGCTCTC 
GTTATTGCTG CAATTTTTGC AACAATCCTC AGGATTTTTG TCGTAGAATC CTATCGGATT
CCTACCGGGT CAATGGAACA GACGCTGCTT GCCGGTGATT TTCTGTTCGT CAACAAGTAC
GTTTATGGTG CAAAAGTGCC GTTTACCGAT TTCAGGCTTC CGGCCGCAGA TACCGTAGAC
CGGGGAGATA TTATTGTATT CAAATTTCCC AAAGACCGTT CGTTGAACTA TATCAAACGA
TGCGTCGCTA TCAGCGGAGA TTTGCTCGAA ATCAGAGATC GTCAACTTTT TGTGAATGGC
AAGTCAGTGG CGCTGCCTGA GCATGCGCAG TTTATCGGCC AGAAAATGCC TCCCGGAGCT
GCTGATTTTC AGATTTTCCC GAGATTTTCA ACCTTTAACA AAGATAATTA CGGCCCTTTG
CGTATTCCTG CAAAAGGTGA TGTGGTGGAG CTCAATGCCC GAACCTATCA GTTGTACGGT
GCTCTCATCG CAGACGAGGG GCATGATATT TCGATTTCAG GAGATCAGGT TTACATCGAC
GGCGTTCCGA AAAGGCAGTA TACCGTAGAG GATAACTACT ATTTTGCCAT GGGAGACAAC
CGCGACAATA GCCTTGACAG TCGGTACTGG GGGTTTCTGC CTGAGCGTGA TATACTTGGA
GAGGCGATGT TGGTCTACTG GTCATGGGAT CCTGACCGCA GCCTGTTTCT TGATCCTGCC
GGAAAACTGT CATCGATCAG ATGGCAGCGA ACAGGTATGA CGGTTCATTG A
 
Protein sequence
MKAEQEKTVK KHSREWFDAL VIAAIFATIL RIFVVESYRI PTGSMEQTLL AGDFLFVNKY 
VYGAKVPFTD FRLPAADTVD RGDIIVFKFP KDRSLNYIKR CVAISGDLLE IRDRQLFVNG
KSVALPEHAQ FIGQKMPPGA ADFQIFPRFS TFNKDNYGPL RIPAKGDVVE LNARTYQLYG
ALIADEGHDI SISGDQVYID GVPKRQYTVE DNYYFAMGDN RDNSLDSRYW GFLPERDILG
EAMLVYWSWD PDRSLFLDPA GKLSSIRWQR TGMTVH