Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1676 |
Symbol | |
ID | 6353983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1842441 |
End bp | 1843271 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642669281 |
Product | signal peptidase I |
Protein accession | YP_001943697 |
Protein GI | 189347168 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.812677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCTG AACAGGAAAA AACGGTGAAA AAACATTCGA GAGAGTGGTT TGACGCTCTC GTTATTGCTG CAATTTTTGC AACAATCCTC AGGATTTTTG TCGTAGAATC CTATCGGATT CCTACCGGGT CAATGGAACA GACGCTGCTT GCCGGTGATT TTCTGTTCGT CAACAAGTAC GTTTATGGTG CAAAAGTGCC GTTTACCGAT TTCAGGCTTC CGGCCGCAGA TACCGTAGAC CGGGGAGATA TTATTGTATT CAAATTTCCC AAAGACCGTT CGTTGAACTA TATCAAACGA TGCGTCGCTA TCAGCGGAGA TTTGCTCGAA ATCAGAGATC GTCAACTTTT TGTGAATGGC AAGTCAGTGG CGCTGCCTGA GCATGCGCAG TTTATCGGCC AGAAAATGCC TCCCGGAGCT GCTGATTTTC AGATTTTCCC GAGATTTTCA ACCTTTAACA AAGATAATTA CGGCCCTTTG CGTATTCCTG CAAAAGGTGA TGTGGTGGAG CTCAATGCCC GAACCTATCA GTTGTACGGT GCTCTCATCG CAGACGAGGG GCATGATATT TCGATTTCAG GAGATCAGGT TTACATCGAC GGCGTTCCGA AAAGGCAGTA TACCGTAGAG GATAACTACT ATTTTGCCAT GGGAGACAAC CGCGACAATA GCCTTGACAG TCGGTACTGG GGGTTTCTGC CTGAGCGTGA TATACTTGGA GAGGCGATGT TGGTCTACTG GTCATGGGAT CCTGACCGCA GCCTGTTTCT TGATCCTGCC GGAAAACTGT CATCGATCAG ATGGCAGCGA ACAGGTATGA CGGTTCATTG A
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Protein sequence | MKAEQEKTVK KHSREWFDAL VIAAIFATIL RIFVVESYRI PTGSMEQTLL AGDFLFVNKY VYGAKVPFTD FRLPAADTVD RGDIIVFKFP KDRSLNYIKR CVAISGDLLE IRDRQLFVNG KSVALPEHAQ FIGQKMPPGA ADFQIFPRFS TFNKDNYGPL RIPAKGDVVE LNARTYQLYG ALIADEGHDI SISGDQVYID GVPKRQYTVE DNYYFAMGDN RDNSLDSRYW GFLPERDILG EAMLVYWSWD PDRSLFLDPA GKLSSIRWQR TGMTVH
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