| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1638 |
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| Symbol | |
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| ID | 6353944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1774734 |
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| End bp | 1775855 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642669243 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001943660 |
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| Protein GI | 189347131 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000343262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGATTG GAAAAAGATA TTTCTCATTC CTGATCGCAG GGGCGATTAT CATTGCCGGG
GTTGTGACAG GCGGAATACT GGGAAAGCGG AATCCGGATG CGAAATCTGA AAAGCCCTCT
CGAAAAGCGG TTGCCCTGAA TATTGTTACC GTCAGCAACG GCGCCGTAGA ATTTCCCGTT
GAGATGAGCG GTTCTATCGA TGCTCTCAGA AAAATCGAGA TGTATGCCGA GGTTTCGGGA
GTCTTTCGCG ACGGTGTCCG ACCGTTCAGG GAGGGCGGCT TTTTTCGTCG CGGCGAGCCG
TTGCTGGTGA TCGAAGATTC CGTTTTTCGT AATAGTGTTC TTGCCGAACG AAGCAGTTTT
CTCAATCTTG TCACTCTGGT GCTTCCCGAT ATCATTATCG ACTTTCCTGA AGAGTCGGCA
AAGTGGAAAC GCTATGCAGA GTCGTTTCGT ATCGAATCTT CGTTGCGTCC GCTTCCCGAG
CCGGCAACCG ACCGGGAGCG AAACTATCTG GCTGCACGCA ATATCTATAA TAAATTCTAT
GCTATCCGAA GCATGGAGGC AACGCTCGGC AAATATCGCA TTACAGCGCC TTTTGACGGT
ACGGTGACGC TCTCCGAAGT AAATCCGGGC GCGCTGATTC GAACGGGACA GAAAATCGGA
GAGTTTGCAG CTTCCGGAAA TTTTGAGCTT CGGGTTTCTG CCGCAATCCG TGATGCCGGG
TTTCTCAAGG TCAATACTCC GGTCATGCTG GTATCCGATG ATTTCAGCGG AAGCGTGAGC
GGCACCATTA AAAGAATCAA TGCAAACATA TCACCCGCAA CGCAGACCGT GTCCGTTTAC
ATCGAGGTTG CGGATCCCAG ACTGAGAGAC GGCATGTACC TGACTGCATT GAAAACGGTT
GCCGTTCCCG ATGCGTTCGC CATTTCCCGT ACGCTGCTGC ATAACGATCA TCAACTCTTC
GTACTTGAGA ATTCCCGATT TGTTTTGAAG TCTGTAAGGG TAATCGCTTA CAATAACGAC
AAGGCGGTCA TTACCGGTCT TCCTGACGGT ACGAAGCTGC CAGCAGAAAA ACTGCCGGGG
ATGTATGACG GAATGGACGC ACGAGCCTTG CTCAAACCGT GA
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| Protein sequence | MVIGKRYFSF LIAGAIIIAG VVTGGILGKR NPDAKSEKPS RKAVALNIVT VSNGAVEFPV
EMSGSIDALR KIEMYAEVSG VFRDGVRPFR EGGFFRRGEP LLVIEDSVFR NSVLAERSSF
LNLVTLVLPD IIIDFPEESA KWKRYAESFR IESSLRPLPE PATDRERNYL AARNIYNKFY
AIRSMEATLG KYRITAPFDG TVTLSEVNPG ALIRTGQKIG EFAASGNFEL RVSAAIRDAG
FLKVNTPVML VSDDFSGSVS GTIKRINANI SPATQTVSVY IEVADPRLRD GMYLTALKTV
AVPDAFAISR TLLHNDHQLF VLENSRFVLK SVRVIAYNND KAVITGLPDG TKLPAEKLPG
MYDGMDARAL LKP
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