| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1637 |
|---|
| Symbol | |
|---|
| ID | 6353943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1771535 |
|---|
| End bp | 1774681 |
|---|
| Gene Length | 3147 bp |
|---|
| Protein Length | 1048 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642669242 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001943659 |
|---|
| Protein GI | 189347130 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000116339 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGGCA TTATCAAATA CTTTGTCAAA TATCCGGTTA TCGGAAATGC CGTGTATCTG
GCAATAATGC TGTTCGGCCT GGTTGCGTTC AGCCAGATCA GAACCACGTT TTTTCCGGAT
ATTCCCCCCA ACTTCGTTTA TGTGACCGCC ACCTATCCGG GGGCATCTCC AGAGGAACTC
GAAGAAGGTG TAACCCTGAA AATCGAGGAC AAGCTCAAAG GGGTTACCGG TATTGACCGG
GTGACCTCGG TTTCCGCTGA AAACAGCGCA ACCGTTTCCG TTGAACTGAA AAAAGGCGCG
GATGCCAATG AACTGCTTCA GGAGGTCACC AACGCCGTCG ATCAGATCAG CTCGTTTCCC
GCCGGTCTTG AAAAGCTCCA GATCTACAAG CAGGACCGCG TTGATTTTGT GGTTGCGTAT
GCACTTTACG GAGATGTCGA TCTTGGAACG CTCAAAGCCT ATGCTCGGCG TATTGAACGG
GATCTTCGCA ATGAAGGTAT CGCTTCAAAA GTCAGGCTGA GCGGTTTTCC GGAGGAGGAG
ATCGAGATCA GTGTGAGTGA ACGGGCGATG GACTCCTATG GAATAACCTT TGCCGAAATA
GCCTCCGCAG TGAACCGTAC CAATCTCAAG ATCACCGGAG GAACCATACG CGGCGAAAGG
GAGGAGCTGC TTATCAGAGC CGACAACAAA GGGTACAAGG CGCGGGATCT GGAAAATCTT
GTCGTACGGG CCGGATCGGG AGGGGCTGTC GTGCGTCTGC GAGACGTTGC GGCCGTGCGC
GACCGCTGGT CTGAAGTGCC CGACAGGACC TGGTTCAACG GTAAACCCTC TGTCACCATC
GATATTGAAA AAAGCACCGA TGAGGACATG TTCGTCATTG CCGGTGGGGT CAAGGAGTAT
ATGGAAGCAT TCGATGCCCG TCACCCCGAT GTGCGTGCCG AAGTGCTCCG CAACGGTTCG
GCAATTGTCA GGGAGCGCGC CGATATTCTC AGTTACAATG GTGTGATCGG TATGATTCTC
GTTGTTCTGT TTCTCTCCTT TTCCCTCAAT CCGAGGCTTG CCCTCTGGGT TGCCGCAGGT
ATTCCCTTCT CCTTTGCCGG CATGTTTATT CTCGGTTCCA TTTACGGCCT GACCATCAAT
GTCGTTTCGC TGCTTGCCAT GATCCTTGTG GTCGGCATTC TGGTCGATGA CGGAATCGTG
ATTGCCGAAA GCATCTATCA GCGATATGAG AAAGGGGAAA AACCTCTGCA GGCGGCAATC
AACGGAACGG CTGAAGTCGT CCCATCCGTT GCCGCCGCAG TCCTGACTAC GGTCGTGCTT
TTTCTTCTTT TTCTTTTTCT TGACGGCGAC CTCGGCAAGC GTGTCAAGGA TATCGCATTC
GTCGCCGTGA CAACCCTCCT GATTTCGCTT GTAGAGAGCG TGCTCATTCT TCCTGCGCAC
ATCGCGCATT CGCGGGCACT GCATGAAGCC CCCGGCCAAA AAACATGGCT GCTGAAAAAG
TCTGAGGAGT TTCTTCATTT CCAGCGCGAC ATTCTCTATG CACCCGTTCT GAAATTCGGC
ATTAAAAATC CACTCATTAC GATCGCCGTG CCGGTAGCCC TGATGTTTAT AACCATCGGC
GCCATGAAGG GCGGGTTGAT AAAAACGACC TTTTTTCCGG TCATCGAACA GGATAACATT
CAGGTGACCC TTGAAATGCA GACCGGCACC AGAGATGCCG TAACCGACAG CGTTCTCACT
GCCATGGAGC GCAATGTCTG GCAGGTTAAC CGCGACTACC TGAAAGGTCA GGAGAACGAG
GAGGGACTCG TAACCGCCAT TGGCCGCACG ATAGGCCCCA AAGGTCATCA GGGCGGTTTG
CGGATTTCAC TGGTTGACAG CCGATTAAGG AAAATCGACA GTCAGGAGAT TGCCGATCGT
ATCCGCCGGA AAACCGGCAC GGTCGAGGGA GCCCGCAAAC TGCAGATCGG AGGCGGCGGA
ATGTGGGGGA TGCCGGTTTC CATTGCACTT AAAAGCGATA ACCTCGTACA GCTCAGGGCT
GCAAGGGAGA AGCTTGAAAC TGCCCTCAAA GGCATGGGAG AACTCAAGGA TGTTTCGGAC
AACGATCCTC CAGGTCTTGA AGAGGTTTCC GTGAAGTTGA ATGCAAAGGC TTATGCTCTC
GGGCTGACCA ATGCAGATGT CATGAACCAG ATTCGCAGCG CATATTTCGG CCTTGAGTCG
CAGCGTCTGC TTCGCGGAAT TGATGAGATC AAGGTCTGGG TCCGTTACCG GGAAACCGAG
CGTTCATCGA TTCGGGCACT CGAAGCCATG CGTATCCGGC TTTCCGATGG GCGTTCCTTT
CCGTTGACCG AGATTGCCGC ACTGAGCATT GCAAGGGGAG TTTCATCGAT CAACCATATC
GATGCACAGC GGGTGGTTAA AATCGAAGCC GACGTTGCTG ATAATAACAC TGCCGTTCCC
GATCTGCTTG AAACGATCAG AGCGAAAATC ATGCCGGGCG TTCTTGCCGA TTATCCTGAT
GTAAGTTTCA ATTTCGAGGG ACAGAGCCGT GAGAGCGGAA AAACCACCGG TTCGATGAAG
ATTGCCTTTC CGGTGCTTTT TTCGATCATG TACCTGATCA TCGTGTTTAC ATTCCGCTCG
TTTCTTCAGG GTTTTATCGT TCTTCTGCTC ATTCCGTTCA GCCTTGTCGG TGTCGCTTGG
GGCCATTTCA TCCAGGGCTA TATTCTCAGC ATGCTCTCTC TTTACGGAGT GATTGCGCTT
ATCGGTATCG TCGTCAATGA CTCCCTGGTC TTTATTAGCA CCATGAACTC CCGGCTCAAG
GAAGGCGCAC TGTTTTCAGA TACCTTGTAC GAAGTTGGAA TCAGCCGTTT TCGTCCGATT
ATTCTCACTT CCCTTACGAC AATAGCCGGT CTTGGGCCGC TGATTTTCGA ACGGAGCCGG
CAGGCGCAGT TTCTTTCCCC GATGGCCATT TCCGTGGCGT ACGGGTTGCT GTTCGGTACA
ACGTTAACCC TGATTATGCT TCCGGCCATG CTTGTGCTTT TCAACAGTGC AAAGCGGAAA
ATCGTGTCTT TTTCTGAAAA ACGGGCAATC ACTGCCGAAG AGGTCGAACC TGCGCTGAGA
GAGGAACTCT TTTCGGAAAT GCACTGA
|
|---|
| Protein sequence | MKGIIKYFVK YPVIGNAVYL AIMLFGLVAF SQIRTTFFPD IPPNFVYVTA TYPGASPEEL
EEGVTLKIED KLKGVTGIDR VTSVSAENSA TVSVELKKGA DANELLQEVT NAVDQISSFP
AGLEKLQIYK QDRVDFVVAY ALYGDVDLGT LKAYARRIER DLRNEGIASK VRLSGFPEEE
IEISVSERAM DSYGITFAEI ASAVNRTNLK ITGGTIRGER EELLIRADNK GYKARDLENL
VVRAGSGGAV VRLRDVAAVR DRWSEVPDRT WFNGKPSVTI DIEKSTDEDM FVIAGGVKEY
MEAFDARHPD VRAEVLRNGS AIVRERADIL SYNGVIGMIL VVLFLSFSLN PRLALWVAAG
IPFSFAGMFI LGSIYGLTIN VVSLLAMILV VGILVDDGIV IAESIYQRYE KGEKPLQAAI
NGTAEVVPSV AAAVLTTVVL FLLFLFLDGD LGKRVKDIAF VAVTTLLISL VESVLILPAH
IAHSRALHEA PGQKTWLLKK SEEFLHFQRD ILYAPVLKFG IKNPLITIAV PVALMFITIG
AMKGGLIKTT FFPVIEQDNI QVTLEMQTGT RDAVTDSVLT AMERNVWQVN RDYLKGQENE
EGLVTAIGRT IGPKGHQGGL RISLVDSRLR KIDSQEIADR IRRKTGTVEG ARKLQIGGGG
MWGMPVSIAL KSDNLVQLRA AREKLETALK GMGELKDVSD NDPPGLEEVS VKLNAKAYAL
GLTNADVMNQ IRSAYFGLES QRLLRGIDEI KVWVRYRETE RSSIRALEAM RIRLSDGRSF
PLTEIAALSI ARGVSSINHI DAQRVVKIEA DVADNNTAVP DLLETIRAKI MPGVLADYPD
VSFNFEGQSR ESGKTTGSMK IAFPVLFSIM YLIIVFTFRS FLQGFIVLLL IPFSLVGVAW
GHFIQGYILS MLSLYGVIAL IGIVVNDSLV FISTMNSRLK EGALFSDTLY EVGISRFRPI
ILTSLTTIAG LGPLIFERSR QAQFLSPMAI SVAYGLLFGT TLTLIMLPAM LVLFNSAKRK
IVSFSEKRAI TAEEVEPALR EELFSEMH
|
|---|
| |