| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1632 |
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| Symbol | |
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| ID | 6353934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1764572 |
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| End bp | 1766146 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642669234 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001943655 |
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| Protein GI | 189347126 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000458404 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATTG TCATAAACCT GTTTCTGCTT GTTTTTGCAG CGGTTGTTTT TTTTGTCATC
GGGTTTTTCG TAGGCAGGTA TTTTCTTGAA CGTATTGGCA CTACCAAGGT TCTTGAAGCG
GAGGAGCGGG CTGTTCAGAT AGTTCAGGAA GCCCAGAAAG AGGCCAATGA GTATAAAGAG
CTCAAGGTCA GTGAAGTGAA TCAGGAGTGG AAGAAAAAGA GACGGGAGTT CGATCAGGAA
GTCGTTGTAA AGAACAACAA ATTCAGTCTC CTTCAGAAAC AGATACAGCA AAAGGAGGGC
CAGCTGAAAA AGCAGGCTCA GGACCTTCGG GATTCCGAGC GCAAAATGCA GGATCAGCGC
AAGGAGGCCG AACAGATCAT GGAAACGGTA AAACTTCGTT CAGCCGAACT TGAGCGGATA
ACCGCCGAAC AGAATCAGCG GCTTGAGAGT ATTGCCAATC TGCAGGCTGA CGAAGCTCGT
CAGATGCTGA TTGACAATAT GGTTTCCAAA GCCCGTGAAG AGGCTACCGA AACCATACAC
CGTATTCATG AAGATGCCGA GCAGCAGGCC GAACGTCTTG CAGAGAAAAC ACTGCTGACG
GCTATCCAGA GAATATCGTT CGAGCAGGCA ACCGAAAACG CGCTCTCGGT CGTTCACATA
CAGAGTGACG AACTCAAAGG CAGAATTATC GGACGCGAAG GCCGCAACAT CAAGGCTTTT
GAAAATGCTA CCGGTGTTGA CATTATTGTC GATGACACCC CGGAGGTCGT CATTCTCTCC
TGTTTCGATC CTTTCCGTCG CGAGCTTGCA AAGCTCACCC TGCAGAAGTT GCTCGTTGAC
GGCATCATCC ATCCCGTAGC CATTGAAAAG GCCTATGAGG ATGCGAAGAA GGAGATCGAC
GATGTGATTA TGAGCGCAGG AGAAGAGGCT CTTGCCGCCT TGCAGATTCC CGATATGCCA
TCCGAACTGG TACGCCTGAT CGGAAACATG AAATTCCATA CCGTATACGG TCAGAATCTT
CTGCAGCACA GCAGGGAGGT CGCCATGCTT TCGGGTCTCA TGGCTGCCGA GCTCAAGCTT
GACGCCCGCA TTGCCAAACG GGCCGGTCTT CTGCACGATA TAGGCCTTGT CCTGCCCGAG
AGCAATGAGC CGCATGCCAT AACCGGAAGC GCATTCCTGA AAAAGTTCAA CGAATCCTCG
ATTGTCATCA ACGCCGTAGC GGCGCATCAT GGAGATGTTG AAAAAGAGTC GCCGCTTGCG
GATCTCATCG ATGCGGCAAA TGTCGTTTCC CTCTCTCGTC CGGGAGCCCG CGGTGCAATT
ACCGCTGACG GCAACGTCAA GCGCCTCGAA AGTCTCGAAG AGATTGCAAA GGGATTTCCC
GGCGTGCTTA AAACCTATGC CCTGCAGGCA GGAAGAGAGA TCAGGGTTAT TGTCGAGGGG
GACAATGTCA GTGATTCGCA GGCCGACGTG CTCGCTCACG ACATTGCCAA CAAGATCGAA
TCGGAAGCCC AGTACCCCGG TCAGATCCGG GTGACCATTG TGCGGGAGCG GCGGTCGATA
GCATATGCGA AGTAA
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| Protein sequence | MGIVINLFLL VFAAVVFFVI GFFVGRYFLE RIGTTKVLEA EERAVQIVQE AQKEANEYKE
LKVSEVNQEW KKKRREFDQE VVVKNNKFSL LQKQIQQKEG QLKKQAQDLR DSERKMQDQR
KEAEQIMETV KLRSAELERI TAEQNQRLES IANLQADEAR QMLIDNMVSK AREEATETIH
RIHEDAEQQA ERLAEKTLLT AIQRISFEQA TENALSVVHI QSDELKGRII GREGRNIKAF
ENATGVDIIV DDTPEVVILS CFDPFRRELA KLTLQKLLVD GIIHPVAIEK AYEDAKKEID
DVIMSAGEEA LAALQIPDMP SELVRLIGNM KFHTVYGQNL LQHSREVAML SGLMAAELKL
DARIAKRAGL LHDIGLVLPE SNEPHAITGS AFLKKFNESS IVINAVAAHH GDVEKESPLA
DLIDAANVVS LSRPGARGAI TADGNVKRLE SLEEIAKGFP GVLKTYALQA GREIRVIVEG
DNVSDSQADV LAHDIANKIE SEAQYPGQIR VTIVRERRSI AYAK
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