Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1580 |
Symbol | |
ID | 6354228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1701984 |
End bp | 1703066 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642669182 |
Product | ferredoxin |
Protein accession | YP_001943604 |
Protein GI | 189347075 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTTG TAATCAACGA TCTGCCCTGT GTCGCTGCAG TAGGGCAGAC TCTCGGAAAG GCCGCCCGGC TCAACCACAG TCATGTGGGT TATGTATGCG GAGGCCACGG AATATGCCAG GCCTGTTATG TGACCGTACT CGAAGGCAAC GAGCTTCTTT CATCGCTTTC CGACATCGAG AAGGCTTTCC TCTCTCCGCG GCAGATTCAA AGTGGCGGAC GTCTCGCCTG CCAGGCCACC ATAACCGGCG AGGGTACCAT AAAGGCACTT TCCCGTCCTG AACAGGCCAA GAGGTTGTTG CTGACCAATC CGGTTGGTTT GTTCGCTTAC GGAGCGGAAA TGGGCAGGGA TACGGCTTCG CAGATTGTGC CGGGTGTGTC GAATCTTGCC GGCAGGGTTC TGCGGGGCGA ACTTGGTGGA CCGGGGGCAC TCGGTGATGT GCTCGAATCC GCAGGTGCAG CCGTTCAGCT CGTTCTTGGC GAAGGTCAGA AAATGATTCC TTTTCGGGAG CAGATCATGA CACTTCTTGG GGCACTTCCC ATAAAAGTAC CGTTTCTTGC CCTGCAGCAG CCGGCGGCGA AAGCTGAAAT GATCTCTCTT ACGGTCAGCG CTAAAGCGCC TGAAGTCCTT CCGTCAGATC CTGTTGTCAT TGTTTCCGGG GTTTCGTCGG ACAGTGCCGA ACCGGAAGCG GTTTCATTCG AAGGCGTTCC GGAAGTACAC GCCCTGAAGC TCATCACTGC GGGGATCAAA AGCTTCGGCG ACCTTCTCGA GCAAGGACGT GACAGGACTG GGCGTCAATC GCTTTCTGCA TCGACCGGTC TTGACGAAGC GATTGTACTG ACTCTGGTGA ACCGTGCCGA TCTGGCAAGG ATCAAGGGGA TCGGCACAGC GTATTCTGAA TTGCTTGAGA TGGCCGGAGT GGATACTGTT CCTGAGCTTG CTCAGCGTAA TCCCGCAAAC CTGCACGCGA AAATCCAGGA AGTCAACGCG AAAAGGAAAC TGGTTCAGCA ACTCCCATCG GCTCTGCAGA TCAAAGAGTG GGTGGCACAG GCCAAATCGC TCGCCCGTAT CGTGACCTAC TGA
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Protein sequence | MNLVINDLPC VAAVGQTLGK AARLNHSHVG YVCGGHGICQ ACYVTVLEGN ELLSSLSDIE KAFLSPRQIQ SGGRLACQAT ITGEGTIKAL SRPEQAKRLL LTNPVGLFAY GAEMGRDTAS QIVPGVSNLA GRVLRGELGG PGALGDVLES AGAAVQLVLG EGQKMIPFRE QIMTLLGALP IKVPFLALQQ PAAKAEMISL TVSAKAPEVL PSDPVVIVSG VSSDSAEPEA VSFEGVPEVH ALKLITAGIK SFGDLLEQGR DRTGRQSLSA STGLDEAIVL TLVNRADLAR IKGIGTAYSE LLEMAGVDTV PELAQRNPAN LHAKIQEVNA KRKLVQQLPS ALQIKEWVAQ AKSLARIVTY
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