Gene Clim_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1580 
Symbol 
ID6354228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1701984 
End bp1703066 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content56% 
IMG OID642669182 
Productferredoxin 
Protein accessionYP_001943604 
Protein GI189347075 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTG TAATCAACGA TCTGCCCTGT GTCGCTGCAG TAGGGCAGAC TCTCGGAAAG 
GCCGCCCGGC TCAACCACAG TCATGTGGGT TATGTATGCG GAGGCCACGG AATATGCCAG
GCCTGTTATG TGACCGTACT CGAAGGCAAC GAGCTTCTTT CATCGCTTTC CGACATCGAG
AAGGCTTTCC TCTCTCCGCG GCAGATTCAA AGTGGCGGAC GTCTCGCCTG CCAGGCCACC
ATAACCGGCG AGGGTACCAT AAAGGCACTT TCCCGTCCTG AACAGGCCAA GAGGTTGTTG
CTGACCAATC CGGTTGGTTT GTTCGCTTAC GGAGCGGAAA TGGGCAGGGA TACGGCTTCG
CAGATTGTGC CGGGTGTGTC GAATCTTGCC GGCAGGGTTC TGCGGGGCGA ACTTGGTGGA
CCGGGGGCAC TCGGTGATGT GCTCGAATCC GCAGGTGCAG CCGTTCAGCT CGTTCTTGGC
GAAGGTCAGA AAATGATTCC TTTTCGGGAG CAGATCATGA CACTTCTTGG GGCACTTCCC
ATAAAAGTAC CGTTTCTTGC CCTGCAGCAG CCGGCGGCGA AAGCTGAAAT GATCTCTCTT
ACGGTCAGCG CTAAAGCGCC TGAAGTCCTT CCGTCAGATC CTGTTGTCAT TGTTTCCGGG
GTTTCGTCGG ACAGTGCCGA ACCGGAAGCG GTTTCATTCG AAGGCGTTCC GGAAGTACAC
GCCCTGAAGC TCATCACTGC GGGGATCAAA AGCTTCGGCG ACCTTCTCGA GCAAGGACGT
GACAGGACTG GGCGTCAATC GCTTTCTGCA TCGACCGGTC TTGACGAAGC GATTGTACTG
ACTCTGGTGA ACCGTGCCGA TCTGGCAAGG ATCAAGGGGA TCGGCACAGC GTATTCTGAA
TTGCTTGAGA TGGCCGGAGT GGATACTGTT CCTGAGCTTG CTCAGCGTAA TCCCGCAAAC
CTGCACGCGA AAATCCAGGA AGTCAACGCG AAAAGGAAAC TGGTTCAGCA ACTCCCATCG
GCTCTGCAGA TCAAAGAGTG GGTGGCACAG GCCAAATCGC TCGCCCGTAT CGTGACCTAC
TGA
 
Protein sequence
MNLVINDLPC VAAVGQTLGK AARLNHSHVG YVCGGHGICQ ACYVTVLEGN ELLSSLSDIE 
KAFLSPRQIQ SGGRLACQAT ITGEGTIKAL SRPEQAKRLL LTNPVGLFAY GAEMGRDTAS
QIVPGVSNLA GRVLRGELGG PGALGDVLES AGAAVQLVLG EGQKMIPFRE QIMTLLGALP
IKVPFLALQQ PAAKAEMISL TVSAKAPEVL PSDPVVIVSG VSSDSAEPEA VSFEGVPEVH
ALKLITAGIK SFGDLLEQGR DRTGRQSLSA STGLDEAIVL TLVNRADLAR IKGIGTAYSE
LLEMAGVDTV PELAQRNPAN LHAKIQEVNA KRKLVQQLPS ALQIKEWVAQ AKSLARIVTY