Gene Clim_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1560 
Symbol 
ID6354208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1678997 
End bp1679482 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID642669166 
Productprotein of unknown function DUF456 
Protein accessionYP_001943588 
Protein GI189347059 
COG category[S] Function unknown 
COG ID[COG2839] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0774261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAA TCGTACTTCT TTGGATAATT GCGGCAGTGC TGCTTGTTAC GGGTTATGCC 
GGGCTTGTGA TTCCTGCCCT GCCGGGTATC GTGCTGATTT TTGCCGGATT TATGGCGGCA 
GCATGGGCCG AGGAGTTCGC GTATGTCGGA TTGGTTCCCC TGACTCTCCT TGGGCTTCTC 
GCCCTTGCAG CCTATTTATT CGAAGCTGCA GCCGGGGTTG TTGGGGCACA GCGTTTCGGA 
GCAGGAAGAG CCGGACTTAC GGGTGCTGCC ATCGGCACCT TCATCGGGAT GTTTTTCGGG 
ATTCCCGGCA TTGTTGCCGG TCCGTTTCTC GGCGCGGTAA CCGGAGAGCT TCTCGCGCGC 
AAGGGATTTC GTGAAGCAGG TTTTGCCGGA CTGGGCACCT GGCTGGGTCT TGCCGCAGGC 
GCAGCGGTAA AAATAGCCAT AGCTTTTGCT ATGGCAGGAG TGTTTCTATT CGCTCGTTTT 
TTGTAA
 
Protein sequence
MELIVLLWII AAVLLVTGYA GLVIPALPGI VLIFAGFMAA AWAEEFAYVG LVPLTLLGLL 
ALAAYLFEAA AGVVGAQRFG AGRAGLTGAA IGTFIGMFFG IPGIVAGPFL GAVTGELLAR 
KGFREAGFAG LGTWLGLAAG AAVKIAIAFA MAGVFLFARF L