Gene Clim_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1477 
Symbol 
ID6354790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1584818 
End bp1585369 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content34% 
IMG OID642669084 
ProductTIR protein 
Protein accessionYP_001943512 
Protein GI189346983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.475025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATTCATCTC TTATTCTAAG CAAGATCTTA GATTGGTTAA CAAGTTTATA 
GAACATCTTT CTGCATTACA GAGGGACGGA AAAGTTTCTC ATTGGTATTG TAGTGAGTTG 
GAGGCTGGCT CTGTTTGGAA TGACGAAATT CAAAAACATC TGGAAGAAGC CGACATCGCT 
TGCTTTATGG TAAGCCCAAA TTTTATGAAA ACCGACTATA TCCATGAGCA TGAAATTAAA 
AAGGCATTTG AGAGGAAAGA TAAAGACCCG AATTTTAAAA TAGTTCCAAT TATATTAAAT 
TTTTGCCGTT GGACAACTGT AAATAATGAT TTAGGGAAAT TTACCGCACT TCCATACACC 
GCAAAGCCCG TTATGGACTT CAAAAATCAG GATATGGCTT GGTACATCAT AGAGGAGTGC 
TTGCGTTTAA TGATTGACAA TGACCTTAAT CCAACAGGAG AAAATTTCTA CAATAATCAA 
AAACTACCAA CAGACGTTTT GAAAATTTAT AATAGAATTG TGGAAGGTAA AGTTGATAAT 
GATAACGTTT AA
 
Protein sequence
MKKIFISYSK QDLRLVNKFI EHLSALQRDG KVSHWYCSEL EAGSVWNDEI QKHLEEADIA 
CFMVSPNFMK TDYIHEHEIK KAFERKDKDP NFKIVPIILN FCRWTTVNND LGKFTALPYT 
AKPVMDFKNQ DMAWYIIEEC LRLMIDNDLN PTGENFYNNQ KLPTDVLKIY NRIVEGKVDN 
DNV