| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1404 |
|---|
| Symbol | |
|---|
| ID | 6356175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1510440 |
|---|
| End bp | 1510925 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642669015 |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_001943443 |
|---|
| Protein GI | 189346914 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATA TTGAAGATAA CATTGTTCGC GCAGGCTACC GCCTCCCTCC GCCTGCTGTT
CCAGCCGGAC TGTATCTGCC TGCGCTCAGA CAGGGAGATA TGGTTTATAC AGCCGGTCAG
CTTCCGCTGA AAGACGGCAA GCTTGTTGAG CCCGGGGGCA AGGGAAAAGT CAATGAAATC
AACCAGCTTG CCGCGACGAC CGCTGCAGGC ACAGCTCTTC TCAATGCCCT GGCGGCCATT
AAAGCCGAGA CAGGATCTCT CGATGCCGTT GAGCGGATCG TAAAGCTTAC GGTTTATGTT
GCAAGCGAAT CGTATTTTTC CGGTCAGCAC CTTGTCGCCA ACGGCATCTC TTCGCTTCTT
GTCGAGTTTT TCGGAGAGAA GGGACGACAC GTGAGAAGTG CTGTCGGTGT CGCTGAATTA
CCTCTCGATG CAAGCGTAGA GATCGAACTT ATCGCAGCCT GTAACCCCTC GTGCAAGCCA
GGATAA
|
|---|
| Protein sequence | MSHIEDNIVR AGYRLPPPAV PAGLYLPALR QGDMVYTAGQ LPLKDGKLVE PGGKGKVNEI
NQLAATTAAG TALLNALAAI KAETGSLDAV ERIVKLTVYV ASESYFSGQH LVANGISSLL
VEFFGEKGRH VRSAVGVAEL PLDASVEIEL IAACNPSCKP G
|
|---|
| |