| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1380 |
|---|
| Symbol | |
|---|
| ID | 6356150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1486909 |
|---|
| End bp | 1487625 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642668990 |
|---|
| Product | nuclease (SNase domain protein) |
|---|
| Protein accession | YP_001943419 |
|---|
| Protein GI | 189346890 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0309494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGC TTTTCTTCCG TAACAGGCTC TGTCTTTTCA TCCTGCCCTT TCTTTTTCTT
TTTGCCGCCT GCAATGATGC TTCGGAATCG GCCAAAGTCG TCAGGATTGC CGATGGAGAT
ACCATTACCA TTCTGCATGC AGACAACACG CAGGAAAGAA TACGACTGTA TGGAATCGAT
TGCCCCGAAA AATCGCAGTC GTTCGGCAAT TCGGCCCGGA AGTTCACCGG TTCACTTGTT
TTCGGTAAAC AGGCAAGCAT CCGCAGTATG GATCGGGATA AATATGGCCG GACTGTGGCC
TGGGTATATG TCGGGGAAAA GAACGTCAAC GAAGAACTCG TCAGGGCAGG CTATGCGTGG
CATTACCGGC AGCACTCGAA TGATGCCGGC CTCAGGAGGC TGGAACATGA AGCCCGTAAG
GCAAAACGGG GGTTATGGTC AGAATCGAAC CCGGTACCGC CATGGGAATA TCGACAAGGG
GTTCGTTATC GTGCATCCGA ATCAAATGCC GAGGTTCAGC AATCAAAACC TTCTTTGGCC
AGAGCAGAAA ACAAAGCGTC ACATTCCGAT ACCCTTTACC ATGGAAATGT GAAAAACCGG
AAATTTCATC TGCCGGGATG CAGCGCCTAC AATTGCAAAA ACTGTACGGC GGAATTCAGA
AACAGGGAGA AGGCAATCGA AGAGGGATAT GAGCCATGCC GTATGTGCAA CCCATAA
|
|---|
| Protein sequence | MSMLFFRNRL CLFILPFLFL FAACNDASES AKVVRIADGD TITILHADNT QERIRLYGID
CPEKSQSFGN SARKFTGSLV FGKQASIRSM DRDKYGRTVA WVYVGEKNVN EELVRAGYAW
HYRQHSNDAG LRRLEHEARK AKRGLWSESN PVPPWEYRQG VRYRASESNA EVQQSKPSLA
RAENKASHSD TLYHGNVKNR KFHLPGCSAY NCKNCTAEFR NREKAIEEGY EPCRMCNP
|
|---|
| |