Gene Clim_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1362 
Symbol 
ID6353772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1462084 
End bp1463412 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content55% 
IMG OID642668971 
Producthypothetical protein 
Protein accessionYP_001943401 
Protein GI189346872 
COG category[S] Function unknown 
COG ID[COG1808] Predicted membrane protein 
TIGRFAM ID[TIGR00271] uncharacterized hydrophobic domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.338301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTA AACTCTTCCA ATACTTCAGC ATCAGTCGCG ATGTGGAGTC GTTCAGGGAT 
ATTCACAGCG CCGTCGAAAG TGACATCGAG TTCAAGGGGG CACGTCTCTG GATCCTTATC
TTCGCCATCG TGCTCGCTTC GGTCGGACTC AACACCAACT CGACGGCCGT CATCATCGGC
GCCATGCTCA TATCTCCGAT CATGGGCCCC ATAAACGGCA TAGGATACAG TATCGCCACC
TACGATTTTG CCCTTCTGCG CCGTTCCTTC AAGCATCTCT CGTTTGCCAT AGCGGCAAGC
CTTGTCACCT CAACGCTTTA TTTCGCGGTG AGCCCGGTTT CGAGCGCCTA CTCCGAGCTG
CTTGCCCGAA CCAGCCCCAC CATATACGAC GTGCTGATCG CTCTCTTCGG CGGCCTTGCC
GGCACGATGT CGCTCACAAC GAGACTGAAA GGCAATGTCG TGCCCGGTGT CGCCATCGCT
ACGGCGCTCA TGCCCCCCCT CTGTACGGCC GGCTACGGTC TTGCAACCGG CCAGTTCCCT
TTTTTTTTCG GCGCCTTTTA CCTCTTCACC ATCAATACCG TTTTTATCGG CCTTTCGACG
GTGATTTTTT CGCAGTTCAT GAAGTTTCCC ATACGAAGCG ATATCGCCGA AGCCCAGAAA
GCGCGCATCA ACAGGTGGAT AACCGTTGTT ATGCTCGTTA CGCTCGTTCC CAGCATCTAT
TTTGGTTTTG TGCTCGTCAA GAAGGAGCGT TTCATCGAGA ATGCGGGCAG GTTCGTTCGA
TCGGCACAGG TTTTCAGGGG CGACTACCTG CTTCGCAACG ATATCGACGC GGACAATCGG
CGGATTTCAC TCAGCTATGC AGGTCGTTCG CTTACGGATG AGAGCAAGGC TGTACTTCGC
AAGCGAGCGG AGGAGTTCGG TCTCGGCGAT GCGACCCTTT CGTTTGAACA GGGGATTTCG
TTTGCCGATA TTACCGGGGA TCTCGGCGAA AAAGACAAGG CTCTGGCGCA ATTGCGGAAT
CTCACGCTCA CCCTCGAGGA GAGCCGGCGA ATCCGTGACA GCCTGGAGCA GCGCGCATAT
ACGGGAAAAC CGCTGCTGAG GGAGTTGCGC ACGGTATTTC CGTCCGTTAC CGCCTGTCTG
TTCGCCGAAC CCTACAGCTT CAGCGCCGGG GATGAGGAGA AACCCCGAAA GTTCGCCTAT
GTGGTCATTT CTTCCTCTTC GGGGCTTGCC GATGTCGAGC GGGAAAAAGT CAAGGCATGG
CTCAAGGCAA GGCTTCAGAA CGATACGCTG CGGGTAGTGT TCGAACAGGA AGGAGAATTG
TTCAGGTAA
 
Protein sequence
MTSKLFQYFS ISRDVESFRD IHSAVESDIE FKGARLWILI FAIVLASVGL NTNSTAVIIG 
AMLISPIMGP INGIGYSIAT YDFALLRRSF KHLSFAIAAS LVTSTLYFAV SPVSSAYSEL
LARTSPTIYD VLIALFGGLA GTMSLTTRLK GNVVPGVAIA TALMPPLCTA GYGLATGQFP
FFFGAFYLFT INTVFIGLST VIFSQFMKFP IRSDIAEAQK ARINRWITVV MLVTLVPSIY
FGFVLVKKER FIENAGRFVR SAQVFRGDYL LRNDIDADNR RISLSYAGRS LTDESKAVLR
KRAEEFGLGD ATLSFEQGIS FADITGDLGE KDKALAQLRN LTLTLEESRR IRDSLEQRAY
TGKPLLRELR TVFPSVTACL FAEPYSFSAG DEEKPRKFAY VVISSSSGLA DVEREKVKAW
LKARLQNDTL RVVFEQEGEL FR