Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1354 |
Symbol | |
ID | 6354547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1449187 |
End bp | 1450830 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642668964 |
Product | Nucleoside phosphorylase-like protein |
Protein accession | YP_001943394 |
Protein GI | 189346865 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.116698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTACC AAGAAATAAA ACTTGAAGAT CTTATAAAGA TAGTTCAGTG TGATATTGCT TTAATTGTTA CTGCTACAGA TACAGAAACA GAAGCTACAC ACAAAAAGCT TTCACCTCTA AATGGTTATT CCAATATTCT ACAAGCATAT GACGATGCTA ATACATATTA TGGAGGTGTC TTTGGGAAAT ATAAAGTTGT ACATGTACAA AGTAATATGG GGGCGATAGG AAGGGATAGT GCTATAATGA CTATTTCAAA TGCAATCAGG ACTTTATCTC CAAAGTTTGT GATAATGATA GGTATTGCTT TTGGTGTTGA TGAAAAAAAA CAGAAAATCG GAGATGTTTT AGTTTCTGAA GGAGTATTGC CATATAACAA CAAAAGAGTT GGTGAAAAAA CAATTCAACG AGGTCTGCCT GCTCCGGCTA GCAAAATTCT TTTAAATAGA TTTAAGTCTC TTAAAACATG GCAATATCTA ATAAATGATT CGATTTTTGC AGAAAAAATA ATATCACCAA TTTTGTCTGG TGAGGAGTTA ATTGATAATA TTGATAGACG AAATGAACTG ATTAAGGAAT TCCCTGTTTC GAAAGGTGGA GAAATGGAAG GTGCCGGTCT ATTTGCAGCA TGTGATGGAA ATGTAGATTG GATTCTTGTT AAGGGAATAT GTGATTTTGC TGATGGAAAT AAAAGTATGA ATAAAAAGGA AAATCAAGAA ATTGCAATTA ATTCAGCTTT AAGTTTATGT CTTGAGCTTT TCAACTCATC TTATGCGTTT TCAGTTTTAG GGCTTACGCC TATTAAGGAT AAATCAGATG TTTTATATTC ATTTGATCAA ATGTTTGTAG ATGAAATTCT TTTTGAGATT TATAATAAAA CAAGTGATCG CTATTATGTT ATAAGAGAGC AGGATATGTT ATTCAACAGA ATCATGGAGC AGTATTGTAT CTGGGTGCAT GGCATTTCTG GGTGCGGAAA AACTAATTTG ATATTAAGAA GTCTTATATT AAATGAGGTT GATTATACTC CGATTTCATT GGCTTCATGT ATTGATCTTA ATGTTGTCGA ATTATTTGGA CAAATTTTGT ATGATTTAGA AATAAAGTTT GGAAAACTTC AAAATCCTTT ATTTAATGAT ACATTTTCAA ATATATGTAG AAATATTCTT TTTTTATTGG AATATAATTG TGCGTATAAA AAACATGTTG TTTTTATAGA AGAAATTCCT ATTTCAAGCG AAAATGATTA CAAGGAATTT GTCTCACATT TTTTCTCTTT GCTTATTTCT AAGAAGCAAA ATCATGGCTT AAATAAAGTA AAATTTGTAC TATCTTCAAT AAAAAATCCA ACAGATCATA TTAAACCTAT TCAGCAAAAA ATACATCAAC AGGTTAAGTT TATTGAATTA AAGAATTGGG ACTCTGATGA TATCGATAAG TTGATTGATT TGATATGTGA ACAGCTAAAT ATTAATCTTG ATGAGGACTT AGTTGTTGAA CTTAAATGTA AGTCAAAAGG TTCGCCAAGG TTTGTGAAAA AATATTTTAG AAATATTTTA GCATATTATA TATCTGATAA AATAAACTAT AAAGAAGTGA TATCTGAAAC CGAACGAGAA CTTAAGAATT TCCATTATGA ATAA
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Protein sequence | MGYQEIKLED LIKIVQCDIA LIVTATDTET EATHKKLSPL NGYSNILQAY DDANTYYGGV FGKYKVVHVQ SNMGAIGRDS AIMTISNAIR TLSPKFVIMI GIAFGVDEKK QKIGDVLVSE GVLPYNNKRV GEKTIQRGLP APASKILLNR FKSLKTWQYL INDSIFAEKI ISPILSGEEL IDNIDRRNEL IKEFPVSKGG EMEGAGLFAA CDGNVDWILV KGICDFADGN KSMNKKENQE IAINSALSLC LELFNSSYAF SVLGLTPIKD KSDVLYSFDQ MFVDEILFEI YNKTSDRYYV IREQDMLFNR IMEQYCIWVH GISGCGKTNL ILRSLILNEV DYTPISLASC IDLNVVELFG QILYDLEIKF GKLQNPLFND TFSNICRNIL FLLEYNCAYK KHVVFIEEIP ISSENDYKEF VSHFFSLLIS KKQNHGLNKV KFVLSSIKNP TDHIKPIQQK IHQQVKFIEL KNWDSDDIDK LIDLICEQLN INLDEDLVVE LKCKSKGSPR FVKKYFRNIL AYYISDKINY KEVISETERE LKNFHYE
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