| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1306 |
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| Symbol | |
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| ID | 6354499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1402244 |
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| End bp | 1406713 |
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| Gene Length | 4470 bp |
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| Protein Length | 1489 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642668921 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_001943351 |
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| Protein GI | 189346822 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCAT ACCGTGTTCG CACTGCCTCT TCGGATCTTT CAGGTCGTTC TGACCGTAAA
AAAATGACTC GACCCAGTGG TCGCAGCGGG ATCCGTCTCT GTCTGCTTCT CGCCCTTCTA
TGCCACACAG GAATACCTGA GAACGCATCC GGTGCGACTA CCAGGCGGCT TGATGAGAAC
TACACAAGCA ATAATACGAC GCTCCAGAGT GACTCGAATT ATAGCAACAC GAATAGTTTT
GGCTTACCCA GAAATGTTAC AATAAAACAG GGAGCTACTG TCTACACTTC CTCCACGACG
AGTATCAATA TCATTGGGTA TACTCCGTTG TCACCGAGAA CCTTTTTTAT CAACGGCACC
CTGAACAACA ATGGTTCTTT ATCAAACAAT GCAGGTTTAG GTGGCAAAAT CAGTATCGGC
AGTACCGGCG CGCTGAACAA TGCAGGCACG GTGATCAATA ATTACGAACT GACCAACAGC
GGCACGTTCA ACAATGCAGG CACGGTGATC AATAATTTTT CGCTGACCAA CAGCGGCACG
TTCACCAACA ACGGAGGGTT GGACAATAAA GGCCTGCTCA CTAACAACAA TACTTTCACC
AATAACGGTA CGCTCACTAA TACGGGTTCT TTCAACGCCG ATGTTATATC TGCTTTTTTT
AATGGAACAG ATATCACTAT AAACCCGGAA AACCTGTTTG ATATAATAGT AGATGGAATC
GGTAGCGTAA TATCAGGTGA AGGGTTAGGC ATCATCTATA ATACTGACGA TTTTACCAAC
AACGGCACGC TGAACAATAA GTTCGTGTTG TTGAACGCTG GTACGCTGAC AAACACCAGC
CCAACCACGC TGAACAACGA AGGCCTGCTT ATCAACACCA AGGATCTCAT CAACAGCGGC
CAGTTCAATA ACAGCGCCAT TGTCATTAAC AGCAGCAACC TGACCAACAC CGGCGTCCTC
GACAACACCG GTTCCGGCAC CTTCGACCTT ACGTCGTTTT TTGACGGGGA GAACTTTTCT
TTCGACTTCA GTAACCTTTC CAGTCTTCTC GCAGGCAATG GAGTTCTTTT AAATTTGAAC
GGCGGAACCA TCGACAACAG CGGCACACTG AACAACGACG GTTTTCTGAT CAATCTGGGT
ACGCTTAACA ATACCAGCGC TACCACGCTG AATAACAGCG GTATTCTCTA TAATGGCAAT
ACCCTGACGA ACACCGGTAC ACTGAACAAC ACTGGTACCG GCACCATAGA CTTTACTCCT
CTTTTCAGCG AAGGCTCGTT TTCTCTTGAC TTCAGTGATT TGTCAGACCT TCTCGGAGGT
AACGGCATTC TTGTCAATGG CGGAACCATC GACAACAGCG GCACACTGAA CAACGACGGT
TTTCTGATCA ATCTGGGTAC GCTTAACAAT ACCAGCGCTA CCACGCTGAA CAACAACTTC
CTGCTCGTCA ATCTGGAGTC CCTGAGCAAT ACTCAAGGAG CCGTGGCGAA CAACAATGGC
ATCATGGTCA ATCTTGGGAC GTTCACCAAT GAAGGCCAAT TTTCCAACGG AAGACCGGTT
TCCGTCCTCA TCTCTGAGCT GACTTCTCTT GATTCAGAAA ATCTGCTCGG TGACATTGCT
TCCACGTTGA CCAGCGGCAT CATGGTTAAT CTTGAAGACG TGAAGAACTC CGGCACGTTT
GACAATAACT TTGTATTTGC CAACATCGGT TCTTTTGAGA ACCAAAGTGG CGGTGTCCTG
AACAACGATT TCCTGTTGGT CAATACCGAA GCGATGTGGA ATAAGACAGG CGGCAACATG
ACCAACAACG GTCTTCTCAT GAACTTCGGC ACGCTCACCA ACGACGGCAC AGTGAGCAAC
AATGGTACGA TCGGCGCATT TTCGCTCGAC AACCCGCTGC AGCTCGGCGC GATCTACAAC
CGCGGTACGC TGAACAATAC CGGCGACTTC ACCAACCGGT TCATCGTTTA CAACGACGGA
GAGCTGAACA CCAGCGGTAC GTTCGATAAC CGGTTCCTGC TCGTCAATGC CGACGATATG
GAAAACAGCG GCAGCATGAC CAACAGCGGT CTCTTCCTGA ACTTCGGTTC ATTCACCAAC
GACGGCTCGC TCGTCAATGA AGGCCCGTTT GGCGCATCGT TCTCGGGCAG CGCATTCGCT
CTCGATGCAA ATACGCTCGA CAACCCGCTG CAGCTCGGCG CGATCTATAA CGGCGCTACG
CTGAACAATA CCGGCGACTT CACCAACCGG TTCATCGTTT ACAACGACGG AGAGCTGAAC
ACCAGCGGTA CGTTCGATAA CCGGTTCCTG CTCGTCAATG CCAACAATAT GGAAAACAGC
GGCAGTATGA CCAACAGCGG TCTCTTCCTG AACTTCGGTT CATTCACCAA CGACGGCTCG
CTCGTCAATG AAGGCCCGTT TGGCGCATCG TTCTCGGGCA GCGCATTCGC TCTCGATGCA
AATACGCTCG ACAACCCGCT GCAGCTCGGC GCGATCTATA ACGGCGCTAC GCTGAACAAT
ACCGGCGACT TCACCAACCG GTTCATCGTT TACAACGACG GAGAGCTGAA CACCAGCGGT
ACGTTCGATA ACCGGTTCCT GCTCGTCAAT GCCAACAATA TGGAAAACAG CGGCAGTATG
ACCAACAGCG GTCTCTTCCT GAACTTCGGT TCATTCACCA ACGACGGCTC GCTCGTCAAT
GAAGGCCCGT TCGGCGCATC GTTGCCCGAG AATGCTTCTG AAATGACAGC AAGTGATCTT
GACAATCCGA TACAGCTCGG AGCGATCTAT AACGGCGGGA ACCTGACGAA TTCCGGAACG
TTCGAAAATG AGTTCCTGCT GGTTAACGCC GGTACGCTGT CGAACAACAC CGAAGGCAGC
ATGACCAACA GTGGTTTTAT TCTGAACTTC GGCACCCTGG CCAATAACGG CGATCTATTC
AATGACGGCG GCTTCAAGAA TCTTGGCATC CTCAAGGGAA ACGGAACCAT TTATGGATAT
TTTTCGAACG ACGGCATAAT TGCGCCAGGC AACTCGATCG GTACACTCAC GTTCGAAGGA
TCCTATACTC ATAACGACAG TGCGATTTAC GCCCTTGAGG TGGACAGTAT CGGCAACTCC
GATTTGATCG ATGTCAAAAA AACAGTTGCC GGCAGAAGCG GCAATGCCAT TCTGAACGGA
GGACTTGTCA ACGTATCGCC TGCAAAAGGG TTCTACAGAT GGGGAACCTT CTACACGATT
CTTACTGCTG AAAACGAAGT CTTCGGTACG TTTGACGATG TCAACTTCCC GCTTTCCTCC
TTATTCCTTG TTCCGTCGCT TCGCTACGAC GACAGGAACG TCTATCTGGA TCTCGTTTCA
GACTTCACCT CCTCGGCACG AACCGATAAT CAGTATGCTG TCGCATCCGC TCTTGACTCC
ATTCCGGTTT CTGTGCAGGG CGACATGGCT GACGTCATGA CCTGCCTGGT TTATCAGCCA
ACCGTAAATT CCGCGCTCAA GGCGATCGAC CGTATAAGCG GACATATCTA CACTGCCCTT
CCCGATGCTT CGTTCTACTC GATCGATCGA TACCTCGGTG CAGTTTCAAG CCATTTCGGC
GGATTCAGCA TGAACGATAA ACAAGGCATC GAAAGTGGAT TCTGGAGCAG CGGATTCGGC
GGCTGGGGCG ACCGTGACGG CACGGACACC TCTTCGCAAT ACACCTACGA ACTTACAGGC
GGCATCTTCG GCTATGACCA CAAACTCAGC GAAACCCTCC TTCTCGGGGT GGCTGCCGGG
TACGCTTCGA CGGATTTGTC CATGGATAAT CTCAACGAAA AAGCCAATGT GGACAGCTGG
CAGGGCTCGC TCTACGGCCT CTACAAAGAT GGCCCCCTGC ATATCGGGCT GATCGGATCC
TATGGCAGCC ACAACTACAC GACCACCAGG CATATCGACT TCTCCTGCGT CAATCGTACC
GCCAGTGCTG ATTACGATGC CTACGACCTG AGTGCATCCC TCGAAGCCGG ATACCGTATC
GACACCGGTA AAAATACCTT TATCATGCCG ACCGCCTCTT TACAGGCCAT CTGGCTGAAC
AGCGAAGCGT TCGCGGAAAA AGGTGCATCC GCGCTGAACC TCATCGTGGA TGATGAGCAT
AGCACAACGC TTCCAGGTCG AATCGGGCTG ACCTTCGGGG TAGAGACTAC GGACAGGAAG
GGAGGCAAAT TCACGCCTGA AGTACGTTTC GCCTTGCGTC ACGATTTTGC TGCCGACAAC
CAGTACTCGC ATCAGGCATC GTTTGCCGGG GCTCCTGATC AATCATTCAC CATCAAAAGC
GACCGTGTGG AGCGTGACAG TTTCGAGGCC GGCGCAACGC TGGCGTACGA AACGAAGTCA
GGTACCAGCA TTTTCGTTTC ATACGACGCC AATCTCGCAA GCGATATGAA CGAACAGGCT
GCGGCGTTCG GTTTCCGTTA TACATGGTAA
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| Protein sequence | MTSYRVRTAS SDLSGRSDRK KMTRPSGRSG IRLCLLLALL CHTGIPENAS GATTRRLDEN
YTSNNTTLQS DSNYSNTNSF GLPRNVTIKQ GATVYTSSTT SINIIGYTPL SPRTFFINGT
LNNNGSLSNN AGLGGKISIG STGALNNAGT VINNYELTNS GTFNNAGTVI NNFSLTNSGT
FTNNGGLDNK GLLTNNNTFT NNGTLTNTGS FNADVISAFF NGTDITINPE NLFDIIVDGI
GSVISGEGLG IIYNTDDFTN NGTLNNKFVL LNAGTLTNTS PTTLNNEGLL INTKDLINSG
QFNNSAIVIN SSNLTNTGVL DNTGSGTFDL TSFFDGENFS FDFSNLSSLL AGNGVLLNLN
GGTIDNSGTL NNDGFLINLG TLNNTSATTL NNSGILYNGN TLTNTGTLNN TGTGTIDFTP
LFSEGSFSLD FSDLSDLLGG NGILVNGGTI DNSGTLNNDG FLINLGTLNN TSATTLNNNF
LLVNLESLSN TQGAVANNNG IMVNLGTFTN EGQFSNGRPV SVLISELTSL DSENLLGDIA
STLTSGIMVN LEDVKNSGTF DNNFVFANIG SFENQSGGVL NNDFLLVNTE AMWNKTGGNM
TNNGLLMNFG TLTNDGTVSN NGTIGAFSLD NPLQLGAIYN RGTLNNTGDF TNRFIVYNDG
ELNTSGTFDN RFLLVNADDM ENSGSMTNSG LFLNFGSFTN DGSLVNEGPF GASFSGSAFA
LDANTLDNPL QLGAIYNGAT LNNTGDFTNR FIVYNDGELN TSGTFDNRFL LVNANNMENS
GSMTNSGLFL NFGSFTNDGS LVNEGPFGAS FSGSAFALDA NTLDNPLQLG AIYNGATLNN
TGDFTNRFIV YNDGELNTSG TFDNRFLLVN ANNMENSGSM TNSGLFLNFG SFTNDGSLVN
EGPFGASLPE NASEMTASDL DNPIQLGAIY NGGNLTNSGT FENEFLLVNA GTLSNNTEGS
MTNSGFILNF GTLANNGDLF NDGGFKNLGI LKGNGTIYGY FSNDGIIAPG NSIGTLTFEG
SYTHNDSAIY ALEVDSIGNS DLIDVKKTVA GRSGNAILNG GLVNVSPAKG FYRWGTFYTI
LTAENEVFGT FDDVNFPLSS LFLVPSLRYD DRNVYLDLVS DFTSSARTDN QYAVASALDS
IPVSVQGDMA DVMTCLVYQP TVNSALKAID RISGHIYTAL PDASFYSIDR YLGAVSSHFG
GFSMNDKQGI ESGFWSSGFG GWGDRDGTDT SSQYTYELTG GIFGYDHKLS ETLLLGVAAG
YASTDLSMDN LNEKANVDSW QGSLYGLYKD GPLHIGLIGS YGSHNYTTTR HIDFSCVNRT
ASADYDAYDL SASLEAGYRI DTGKNTFIMP TASLQAIWLN SEAFAEKGAS ALNLIVDDEH
STTLPGRIGL TFGVETTDRK GGKFTPEVRF ALRHDFAADN QYSHQASFAG APDQSFTIKS
DRVERDSFEA GATLAYETKS GTSIFVSYDA NLASDMNEQA AAFGFRYTW
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