Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1304 |
Symbol | |
ID | 6354497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1400925 |
End bp | 1401701 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668919 |
Product | Integrase catalytic region |
Protein accession | YP_001943349 |
Protein GI | 189346820 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGC GTAAAAATTG GATCAGCGAC AAAGAACAGT TGTCGGTATC TACCCAATGT GAACTTGCCG GAGTAACCCG GTCAGGGTAC TACGGGCAAA GTAAAAGCCT CATGCCAAAT ACTGAAGATC TGGAACTGAT GAAGCTTATC GACGAGGAGT ACACCCGACA TCCGTTTTAT GGAAGCCGAC GGATGAAGCA GGTCCTGCTC ACCCAAGGGC GCAAGGTCAA CCGGAAACGA GTACAGCGCC TGATGCGTAA CCTGGGGCTT GCGGGTATGG CTCCAGGGCC CAATACCAGC AAACCGCATC CGCAGCACAA GATCTATCCA TACCTGTTGC GAGGTCTTGC CATTACCAGA CCGAACCATG TCTGGTCGAC CGATGTGACC TATTGCCGGT TACCCGGCGG CTTTATGTAT CTGACGGCTG TCATCGACTG GTATTCCCGC AAGGTGCTGG CATGGAGGCT TTCGAATTCC CTGGATAGCA GCTTCTGTGT TGACTGCCTT GAGGAGGCGA TCCGCAAGTA TGGGACACCG GAAATCTTCA ACACTGATCA GGGCGTTCAG TACACCAGTG ATGCGTTCAC CAGCGTGCTC AAGAGCCATG AGATCCGCAT CAGCATGGAT GGCCGTGGCA GGGCCTTGGA CAATGTTTTC GTCGAGCGGT TATGGCGGAA CGTCAAGCAG GAAGACCTGT ACCTGAAAGG CTATGAAACA GCGGTAGAAA TGATGCGGGA TTCATGTCAG AATAGAGTGC GTATCCGCAT TTGTTGA
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Protein sequence | MKARKNWISD KEQLSVSTQC ELAGVTRSGY YGQSKSLMPN TEDLELMKLI DEEYTRHPFY GSRRMKQVLL TQGRKVNRKR VQRLMRNLGL AGMAPGPNTS KPHPQHKIYP YLLRGLAITR PNHVWSTDVT YCRLPGGFMY LTAVIDWYSR KVLAWRLSNS LDSSFCVDCL EEAIRKYGTP EIFNTDQGVQ YTSDAFTSVL KSHEIRISMD GRGRALDNVF VERLWRNVKQ EDLYLKGYET AVEMMRDSCQ NRVRIRIC
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