Gene Clim_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1304 
Symbol 
ID6354497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1400925 
End bp1401701 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content53% 
IMG OID642668919 
ProductIntegrase catalytic region 
Protein accessionYP_001943349 
Protein GI189346820 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGC GTAAAAATTG GATCAGCGAC AAAGAACAGT TGTCGGTATC TACCCAATGT 
GAACTTGCCG GAGTAACCCG GTCAGGGTAC TACGGGCAAA GTAAAAGCCT CATGCCAAAT
ACTGAAGATC TGGAACTGAT GAAGCTTATC GACGAGGAGT ACACCCGACA TCCGTTTTAT
GGAAGCCGAC GGATGAAGCA GGTCCTGCTC ACCCAAGGGC GCAAGGTCAA CCGGAAACGA
GTACAGCGCC TGATGCGTAA CCTGGGGCTT GCGGGTATGG CTCCAGGGCC CAATACCAGC
AAACCGCATC CGCAGCACAA GATCTATCCA TACCTGTTGC GAGGTCTTGC CATTACCAGA
CCGAACCATG TCTGGTCGAC CGATGTGACC TATTGCCGGT TACCCGGCGG CTTTATGTAT
CTGACGGCTG TCATCGACTG GTATTCCCGC AAGGTGCTGG CATGGAGGCT TTCGAATTCC
CTGGATAGCA GCTTCTGTGT TGACTGCCTT GAGGAGGCGA TCCGCAAGTA TGGGACACCG
GAAATCTTCA ACACTGATCA GGGCGTTCAG TACACCAGTG ATGCGTTCAC CAGCGTGCTC
AAGAGCCATG AGATCCGCAT CAGCATGGAT GGCCGTGGCA GGGCCTTGGA CAATGTTTTC
GTCGAGCGGT TATGGCGGAA CGTCAAGCAG GAAGACCTGT ACCTGAAAGG CTATGAAACA
GCGGTAGAAA TGATGCGGGA TTCATGTCAG AATAGAGTGC GTATCCGCAT TTGTTGA
 
Protein sequence
MKARKNWISD KEQLSVSTQC ELAGVTRSGY YGQSKSLMPN TEDLELMKLI DEEYTRHPFY 
GSRRMKQVLL TQGRKVNRKR VQRLMRNLGL AGMAPGPNTS KPHPQHKIYP YLLRGLAITR
PNHVWSTDVT YCRLPGGFMY LTAVIDWYSR KVLAWRLSNS LDSSFCVDCL EEAIRKYGTP
EIFNTDQGVQ YTSDAFTSVL KSHEIRISMD GRGRALDNVF VERLWRNVKQ EDLYLKGYET
AVEMMRDSCQ NRVRIRIC