Gene Clim_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1257 
Symbol 
ID6355358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1358662 
End bp1359354 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID642668873 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_001943303 
Protein GI189346774 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00289092 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGA GTGAGTGCAT AGAAAATTGT CTTGACAGAA CTTATCCGTT TTTTACTGAC 
ACAGCCTTTG CTACGGAGGT TCTCGACATC ATGCAGGAAA AGGGCATTGA CAGTGCTCCT
GTCCTGCATG ACGGGAAAGC TGTGGCTGTT GTAACGCTTG CCGATGTTTT GCCGGCACGA
CGGCACCCGG AAAAAAAGGA AGGCCTCCGC CTGAGCGAGA TGCGTATCAG CGAGGTCAAA
AGCATCGGTC ATCATGAACA TCTTTTCGAT CTTTTCGAAC AGTTACCCTT ATTTGCGCAT
TCAATTATTC CGGTATCCGA TGACGACGGC AGGTATGCCG GTATTATCGA ACAAAGAAAG
ATCCTTCGAA AAATTGCGGA GTTGTTCCAT CTGGGAAAGG AAGCAACGAC TCTTGAACTC
GAGTTGCCGT CGCACAGCCT CAAACTCTCG GAAGTTATTG CCACTCTCGA GAAAAACGAT
GCGACACTCC TGAGTTTCGG TTCATCCTTT GCAGATTCCG ATAAAGAGAG GATAATAGTA
ACCTTCAGGG TTCAGACACA CGATCAGTTC CGTCTGGTCA AAAACATGGA AAAATACGGG
TATACGGTTC GCTACGCATC GCCACTGTCG CAATCGGAGT ATGACGAACT GAGAGAAAAG
GCGCTTGAAT TCATACGCTA TATGGATATG TAG
 
Protein sequence
MLLSECIENC LDRTYPFFTD TAFATEVLDI MQEKGIDSAP VLHDGKAVAV VTLADVLPAR 
RHPEKKEGLR LSEMRISEVK SIGHHEHLFD LFEQLPLFAH SIIPVSDDDG RYAGIIEQRK
ILRKIAELFH LGKEATTLEL ELPSHSLKLS EVIATLEKND ATLLSFGSSF ADSDKERIIV
TFRVQTHDQF RLVKNMEKYG YTVRYASPLS QSEYDELREK ALEFIRYMDM