Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1257 |
Symbol | |
ID | 6355358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1358662 |
End bp | 1359354 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642668873 |
Product | putative signal transduction protein with CBS domains |
Protein accession | YP_001943303 |
Protein GI | 189346774 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00289092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGA GTGAGTGCAT AGAAAATTGT CTTGACAGAA CTTATCCGTT TTTTACTGAC ACAGCCTTTG CTACGGAGGT TCTCGACATC ATGCAGGAAA AGGGCATTGA CAGTGCTCCT GTCCTGCATG ACGGGAAAGC TGTGGCTGTT GTAACGCTTG CCGATGTTTT GCCGGCACGA CGGCACCCGG AAAAAAAGGA AGGCCTCCGC CTGAGCGAGA TGCGTATCAG CGAGGTCAAA AGCATCGGTC ATCATGAACA TCTTTTCGAT CTTTTCGAAC AGTTACCCTT ATTTGCGCAT TCAATTATTC CGGTATCCGA TGACGACGGC AGGTATGCCG GTATTATCGA ACAAAGAAAG ATCCTTCGAA AAATTGCGGA GTTGTTCCAT CTGGGAAAGG AAGCAACGAC TCTTGAACTC GAGTTGCCGT CGCACAGCCT CAAACTCTCG GAAGTTATTG CCACTCTCGA GAAAAACGAT GCGACACTCC TGAGTTTCGG TTCATCCTTT GCAGATTCCG ATAAAGAGAG GATAATAGTA ACCTTCAGGG TTCAGACACA CGATCAGTTC CGTCTGGTCA AAAACATGGA AAAATACGGG TATACGGTTC GCTACGCATC GCCACTGTCG CAATCGGAGT ATGACGAACT GAGAGAAAAG GCGCTTGAAT TCATACGCTA TATGGATATG TAG
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Protein sequence | MLLSECIENC LDRTYPFFTD TAFATEVLDI MQEKGIDSAP VLHDGKAVAV VTLADVLPAR RHPEKKEGLR LSEMRISEVK SIGHHEHLFD LFEQLPLFAH SIIPVSDDDG RYAGIIEQRK ILRKIAELFH LGKEATTLEL ELPSHSLKLS EVIATLEKND ATLLSFGSSF ADSDKERIIV TFRVQTHDQF RLVKNMEKYG YTVRYASPLS QSEYDELREK ALEFIRYMDM
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