| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1243 |
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| Symbol | |
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| ID | 6355344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1341862 |
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| End bp | 1343121 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642668859 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001943289 |
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| Protein GI | 189346760 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTGCG AGATATCGAC AAATAAGCCG ATTCACCTGA AACGGATTAC TCTGGCCGGA
GCGCTCTTTC TGCTGCTGCT GGCTGCCGTT ATCAGCGCAT TCATGCTTTA CCGGAATGCG
CTTGTCAGTG ACATGCAGCG CAAACAGGCG CTCTATCTCG ATCTTGTGGA GTTGAGGGGA
AAAGTTGCCG GGTTCGAAAA AAGCCGTGAA ATTACAAGCA TGGATGAATC CGCGACGATC
AAGGTTATGC AGTTCATGCT CGATGAGGTT CTTGAAAGTG CCGCGGCCGC CGGCAAACCG
GATATTCCGG GAGTACTGCT CCGTAAACGG AACGATCGAG GCTACTTTTC GTCGGCCAAT
CGCGAAGTTT TTCTGCTTGC GCTCGACAGC AGTACGCGAA AAGCAGAAAC GGAACTGCGG
ATAGCGCTCG ATGCCTGCAT CCGCATCAGC AATATTTTCG TCATGACAGT GTCGTTTTTG
TTTGTTGCGC TCATCTTCGT TTCGTGGAGG CGTTTCTACA TCAACTATTC CATGACCCTG
ATACCGCTGT CGCGTCTTGC GCAAAAAATC GGCATGATCA ACAAAAATAT TCCTGAAAGC
ATTCATGATA CTGCTGAAGA GATCAGAAAC GATCTTGCTG CAGCTCCGCA ATCCTGGGAA
ATATCGCGTA TAACCGACAC CATAGCGGAG TTCTGCAAGG ATATCGAAGC AAAAAATAAA
AAGCTTGACG AGCTCTACAT CCGGGATGAA AAAACCAATC TGTATAATTA CAGGCATTTC
AAGGAACATC TCATAATGGA GATCGAGAGA TCGAAACGGC TTGACGACAA AGTATCGATG
GCTATGATCG ATATCGATCA TTTCAAGCTC TATAACGACG AGAACGGTCA TGTCGCCGGA
GATCGTGTGC TCGAGCAGCT TGCCGGTATT ATCGGAAACA CCTGCCGGAC ATCCGATATG
CCCTCAAGGT TCGGCGGAGA GGAGTTCGCC GTGCTCTTTC CCCGAACAGG AATCGATACC
GCCATGCAGA TTTCCGACCG TCTGCGCATG ATAATCAGTG CCGAACCTGT CGATCATGAA
AAAAAGCAGC CGAGCGGACG TCTGACGGTC AGTATCGGCA TAGCGACGTT TCCGGATGAT
GCCCAGGACT GGTACACCCT TGTCAACAAT GCCGACCGGG CACTCTACCA AGCAAAATCC
GCCGGACGAA ACCGGGTTAC AGCGTTTTCG ACCATCAAAA GCAAAGAGGA CAACCCATGA
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| Protein sequence | MSCEISTNKP IHLKRITLAG ALFLLLLAAV ISAFMLYRNA LVSDMQRKQA LYLDLVELRG
KVAGFEKSRE ITSMDESATI KVMQFMLDEV LESAAAAGKP DIPGVLLRKR NDRGYFSSAN
REVFLLALDS STRKAETELR IALDACIRIS NIFVMTVSFL FVALIFVSWR RFYINYSMTL
IPLSRLAQKI GMINKNIPES IHDTAEEIRN DLAAAPQSWE ISRITDTIAE FCKDIEAKNK
KLDELYIRDE KTNLYNYRHF KEHLIMEIER SKRLDDKVSM AMIDIDHFKL YNDENGHVAG
DRVLEQLAGI IGNTCRTSDM PSRFGGEEFA VLFPRTGIDT AMQISDRLRM IISAEPVDHE
KKQPSGRLTV SIGIATFPDD AQDWYTLVNN ADRALYQAKS AGRNRVTAFS TIKSKEDNP
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