Gene Clim_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1227 
Symbol 
ID6355328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1323786 
End bp1324433 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content54% 
IMG OID642668843 
Productprotein of unknown function DUF477 
Protein accessionYP_001943273 
Protein GI189346744 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA TAGTATCGGA TCAGGAGCGC AGTCGTCTGG ATGAGCGCAT TGCCGAAACG 
GAACGGCGCA CCGGAACACA GATCGTCCTG AGCGTCATTC AGCGAAGCGA TTCCTATGCG 
GAACTCCCGT GGAAAGCGTT TGCCCTCGGC GCATCGGGCG CCGGACTGAT CCTTCTTTTG 
CTCTATTGGC GGTTGTACGA CTGGTATCCG GATGTGTCCG CTCGAATCAT GGTGTCGGGC 
ATGCTCTCAT GTGGCGCCCT GCTGGCGCTC CTGAGCGTGA TGTTACCACG ATTCGCGAAA 
TGTTTTTTAT CCGACTATCG CGCCGAAGCG GAAGTGCGGC AGTATGCAAA ATCGCTGTTT 
CTGGATCGGG AGCTGTTTGC TACCCGGAAA AGGAGTGGCA TTCTGCTGCT GCTGAGTCTG 
TTTGAGCGTC GGGTTGTTGT TTTGCCTGAC AGGGGAGTGG ATGATCGTTT CGGGGAAGCG 
GATGTGGAAA AAATGATAGC GGCAATGACT CCGTTTCTGA AGCGTAAACA GATCGGTCAG 
GCATTCGATG CCGGTCTGGA CTATCTCACC CGAATATTGA CTACAGCTTC TCCGGAGGCT 
TGTAACGACG AATTGCCAAA TGAAATCATC GGGGAGAAGG GAATATGA
 
Protein sequence
MKQIVSDQER SRLDERIAET ERRTGTQIVL SVIQRSDSYA ELPWKAFALG ASGAGLILLL 
LYWRLYDWYP DVSARIMVSG MLSCGALLAL LSVMLPRFAK CFLSDYRAEA EVRQYAKSLF 
LDRELFATRK RSGILLLLSL FERRVVVLPD RGVDDRFGEA DVEKMIAAMT PFLKRKQIGQ 
AFDAGLDYLT RILTTASPEA CNDELPNEII GEKGI