| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1206 |
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| Symbol | secA |
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| ID | 6353723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1302896 |
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| End bp | 1305979 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642668822 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001943252 |
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| Protein GI | 189346723 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.944412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAA TTTTTGAGAA GATATTCGGA TCAAAGCACG ATAAGGACAT AAAGAAAATA
CAGCCTGTTA TCCAGCGAAT CAACGAGCTG CAGCTCTCCT TTCAGTCGCT TTCTGACGAC
GGATTAAAGG AAATGGGGCT TCAGCTGCGC AGTACGGCTC GCGGCGCCTT ACGCCCTCTG
GAGGAGAAAA AACAGGAACT GCTCTCAAAG CTGAGCACCC CGGATATTCC CCTTGAAGAG
GCCGACAGGA TCAACGACGA ACTCGATACC CTTTCTGAGG AGTATGAAAA AGCAACCGTA
TCGGTGCTCG AGGAAATTCT TCCGGATACA TTCGCCCTGG TAAAAGACAC CTGCCGCCGT
TTGAAAGGGC ATGTTTACAC CGTGATGGGG CATGATATGA CATGGGATAT GGTACCTTAC
GACGTGCAGC TTATCGGCGG CATGGTCCTC CATTCAGGCC GCATATCCGA AATGGCTACC
GGTGAAGGCA AAACCCTTGT CTCTACACTT CCGATATTTC TCAATGCGTT GACAGGCCGA
GGTGTACATG TCGTTACGGT GAACGACTAT CTGGCACAGC GCGACAAAGA GTGGATGACG
CCGGTATTCG AGTATCACGG CCTGAGCGTA GGTGTCATTC TCAACACCAT GCACCCGTTC
GAACGCCGTG AGCAGTATCG GTGCGATATT ACGTACGGCA CCAATAACGA ATTCGGTTTT
GACTACCTCC GCGACAACAT GGCAGGCAGC GTCGAAGAGA TGGTACAGCG CGATTTCTAT
TTCGCCATTG TCGATGAGGT GGACAGCGTC CTGATCGATG AAGCCAGAAC CCCGCTGATT
ATTTCCGGTC CGGTACCCAA TGCCGACAAC AGCAAGTTTC AGGAAATCAA GCCATGGATC
GATCAGCTTG TCCGCAACCA GCAGCAACTC GTGGCATCGT ATCTGACCGA TGCGGAAAAA
ATTCTTAAAA CGAAACCGGG CGATTTCGAT GCCGGGCTTG CACTCCTGAG AGTCAAAAGG
GGCCAGCCGA AAAACAGCCG ATTCATCAAA ATGCTCTCGC AACAGGGTCT GGCAAAGCTG
GTGCAGGGCA CGGAAAACGA GTTTCTCAAG GACAATGCCA GTCGCATGCA CGAAGTCGAT
GACGAACTCT TCTATGCCGT TGATGAAAAA GCCGGCACTA TCGATCTGAC CGATAAGGGC
CGGGATTTTC TAAGCCGCCT GAGCCATCAG GACAGCGACA TCTTTCTCCT TCCGGATGTC
GGGTCGGAAA TTGCCATTAT AGAGAGCAAT GCCTCGCTCT CCGCCGCAGA GAAAGTCAAA
CAGAAGGATG CAGTTTACCG GCTCTTTGCC GATCGTTCCG AAAGGCTGCA CAACATCAGC
CAGCTGCTCA AGGCATTCTC TCTTTTCGAA CGTGACGACG AATATGTCGT CCAGGATGGA
AAGGTGATGA TTGTCGACGA ATTTACCGGA CGAATTCTGC CGGGCCGACG CTACAGTGAT
GGTCTGCATC AGGCTATCGA AGCCAAGGAA AATGTCAGGA TTGAAGGCGA AACGCAGACC
ATGGCGACCA TCACCATACA GAATTTCTTC CGTCTTTATA AAAAGCTTGC CGGCATGACC
GGTACTGCCG AAACCGAAGC CTCGGAATTC TACGAGATTT ACAAGCTCGA TGTAGTGGTT
ATTCCAACCA ACAGACCGAT CGTGCGCAAG GATATGGACG ATCTGGTTTA CAAGACCAGG
AGGGAAAAGT ACAATGCCGT TGTCGAGAAG GTCGAAGAGC TGCAGAAAAA GGGGCAGCCG
GTACTTGTAG GAACCGCAAG CGTCGAGGTA TCGGAAACCC TTTCGAGAAT GCTGCGCGGC
AAACGCATAG CGCACAGCGT ACTGAACGCA AAACAGCATG ACCGGGAAGC TGAAATCGTT
GCCGCTGCAG GCCAGAAAGG TGCGGTCACC ATTGCCACGA ACATGGCCGG AAGAGGCACC
GACATCAAGC TCGGTTCCGG CGTCCGGGAG CTTGGCGGGC TCTTCATTCT CGGGTCGGAA
CGGCATGAAT CACGCCGTAT CGACCGGCAG CTCCGCGGAC GCGCTGGACG TCAGGGCGAT
CCCGGAGAAT CGGTCTTTTT TGTTTCGCTT GAAGATGAAC TGATGCGTCT GTTCGGTTCA
GAACGGGTTA TTTCGGTCAT GGACCGACTT GGACATGAAG AGGGTGACGT CATCGAGCAC
ACGATGATCA CCAAATCGAT TGAAAGAGCT CAGAAAAAGG TGGAGGAGCA GAACTTTGCC
ATCCGGAAAC GTCTTCTTGA ATATGACGAT GTGCTCAATC AGCAGCGCGA CGTTATCTAT
ACAAGAAGAA AAAACGGCCT TCAGAAAGAA CGCCTCACAA GCGATATTTT CGATCTGCTC
AGAGATTACT GCGATATGGT GGTCAAAAAA TATGAAAAGG CGTTCGACCC TGAAGAACTT
GAAGAACGCC TGCTCAGGGA ACTTTCTGTC GAATTCCGGC CTGAAAGCGG TCTGTTTGAC
CGTGAAGGCG CCAAAGGCAT TGCCGACAAA CTCTATGAGA CGGCTCTCGC CTTCTACTCG
CGCAAGGAAA AGGAAATTCC CGAAGAGATC ATGGGGCAAA TTGAAAAATA TGCCGTGCTG
AGCGTCATCG ATAAAAAGTG GAGGGAACAT CTCAGAGAGA TCGACTCTCT GCGGGAAGGC
ATAAACCTGC GGGCCTATGG CCAGAAAGAT CCGCTGCTGG AATACAAGCA GGAGGCTTTC
CGGCTGTTCG TCGTTCTTTT GCAGGAGATC GAACTCGAAA CGCTTTCGTT GGCCTTCAAA
CTTTTTCCGG TCAATCCCGA TGAAGCACGC GAAATAGAAG CACGCCAGAA AAAGGAGGCG
CTTCGACAGG AAAAACTTGT TGCGCAGCAT CAGGCCGCGG AAAGCATCTA TCAGCATATC
GAGGAATCGG GCACATCGAA TGCAGACAAC GCCGGCGATA ATGGACCGCA AACGGTTATA
GCCGAAAAAA AACCAGGGCG TAACGACCTG TGCCCCTGCG GCAGCGGAAA AAAATATAAA
AACTGTCACG GCCAGCAGCC ATGA
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| Protein sequence | MLKIFEKIFG SKHDKDIKKI QPVIQRINEL QLSFQSLSDD GLKEMGLQLR STARGALRPL
EEKKQELLSK LSTPDIPLEE ADRINDELDT LSEEYEKATV SVLEEILPDT FALVKDTCRR
LKGHVYTVMG HDMTWDMVPY DVQLIGGMVL HSGRISEMAT GEGKTLVSTL PIFLNALTGR
GVHVVTVNDY LAQRDKEWMT PVFEYHGLSV GVILNTMHPF ERREQYRCDI TYGTNNEFGF
DYLRDNMAGS VEEMVQRDFY FAIVDEVDSV LIDEARTPLI ISGPVPNADN SKFQEIKPWI
DQLVRNQQQL VASYLTDAEK ILKTKPGDFD AGLALLRVKR GQPKNSRFIK MLSQQGLAKL
VQGTENEFLK DNASRMHEVD DELFYAVDEK AGTIDLTDKG RDFLSRLSHQ DSDIFLLPDV
GSEIAIIESN ASLSAAEKVK QKDAVYRLFA DRSERLHNIS QLLKAFSLFE RDDEYVVQDG
KVMIVDEFTG RILPGRRYSD GLHQAIEAKE NVRIEGETQT MATITIQNFF RLYKKLAGMT
GTAETEASEF YEIYKLDVVV IPTNRPIVRK DMDDLVYKTR REKYNAVVEK VEELQKKGQP
VLVGTASVEV SETLSRMLRG KRIAHSVLNA KQHDREAEIV AAAGQKGAVT IATNMAGRGT
DIKLGSGVRE LGGLFILGSE RHESRRIDRQ LRGRAGRQGD PGESVFFVSL EDELMRLFGS
ERVISVMDRL GHEEGDVIEH TMITKSIERA QKKVEEQNFA IRKRLLEYDD VLNQQRDVIY
TRRKNGLQKE RLTSDIFDLL RDYCDMVVKK YEKAFDPEEL EERLLRELSV EFRPESGLFD
REGAKGIADK LYETALAFYS RKEKEIPEEI MGQIEKYAVL SVIDKKWREH LREIDSLREG
INLRAYGQKD PLLEYKQEAF RLFVVLLQEI ELETLSLAFK LFPVNPDEAR EIEARQKKEA
LRQEKLVAQH QAAESIYQHI EESGTSNADN AGDNGPQTVI AEKKPGRNDL CPCGSGKKYK
NCHGQQP
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