Gene Clim_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1183 
Symbol 
ID6353699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1276654 
End bp1277298 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content49% 
IMG OID642668799 
ProductSNARE associated Golgi protein 
Protein accessionYP_001943230 
Protein GI189346701 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATT CCATAACCGT TTATCTGCAG CACGCGGATC CTGCTGCGAT CTATGTTTTT 
CTTTTCTGCA TAGCATTTCT TGAAAACGTA GTACCCCCGA TTCCCGGGGA TGTTCCCGTA 
GCGTTCATCG GGTATCTGAT CCATCACAGC AGAATTTCTT TTTTTGTTTC GGTCTTGTGG 
GCCTCGGCGG GTTCGACGGC GGGATTCATG CTGGTATATC TTCTGAGCCG CCATCTCGGG 
ATGAAGCTTT ATGCCGAAGA TGGTTCGCCC ATGCAGCATA GCTTATCCAA AAGCGTGCAC 
CGCTTTTTTC CTCCTGCCGA TATGGAGTTG CTGCGAGACC GTTTTTCCGC TCATGGCTAT 
CTTGCCGTAC TTGCCAACCG GTTTCTTTTC GGTTCAAGGG CGGTTATTTC GGTAATGGCG 
GGTTTAATGC ATCTGAAACC GCATCTTGTT CTGCTTGCTG CCGCATCAAG CGCAACGGTA 
TGGAATGTAC TTCTGCTATA CGGAGGGCTT CTGCTTGGCC GGAACTGGCA GGAGATCGGC 
AGATATGCCG CCTTGTACAG TCTTCCTGTT TCTCTTCTTT TTCTTGCTCT TCTTTTTTTT 
TCTGTCCTGC GCTTTGTTCA GGAAAGAAAA CGGAGGCATG AGTGA
 
Protein sequence
MLDSITVYLQ HADPAAIYVF LFCIAFLENV VPPIPGDVPV AFIGYLIHHS RISFFVSVLW 
ASAGSTAGFM LVYLLSRHLG MKLYAEDGSP MQHSLSKSVH RFFPPADMEL LRDRFSAHGY 
LAVLANRFLF GSRAVISVMA GLMHLKPHLV LLAAASSATV WNVLLLYGGL LLGRNWQEIG 
RYAALYSLPV SLLFLALLFF SVLRFVQERK RRHE