| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1066 |
|---|
| Symbol | |
|---|
| ID | 6353768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1168838 |
|---|
| End bp | 1170349 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642668683 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_001943114 |
|---|
| Protein GI | 189346585 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.641596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGCG GCAGGTCGAA GGCTATAGCC GTGTTCGGCA CGGCTTCGGA TGTCGGCAAG
AGCGTGGTGG CAACCGCGAT CTGCCGTATT TTTCGTGATG CCGGCATCGA TGTGGCGCCT
TACAAGGCGC AGAACATGTC GAACAACTCC GGCGTTACGC CTGACGGGTT CGAGATCGGG
CGTGCGCAGA TCGCACAGGC CGAAGCGGCA AGAGTTGTGC CGACGGCCGA TATGAATCCT
GTGCTTCTGA AGCCGAACTC GGATACCGGC GCGCAGGTGG TGCTGCAGGG AAAGGTGTGC
AGCACCGAGA GCGCAAAAGG GTATTTCAGG GATACCTCGC TCTGGGCTGC AGCGGCTCGC
GAAAGTCTCG AACGGCTCAT GAAGCGGTAT GAGCTTGTGG TTATCGAGGG TGCCGGTTCG
TGCGCGGAAA TGAATCTGTA TCAACGGGAT TTCGTGAATT TCAGAACTGC GAGAGAGTCC
GGCGCTTCGG TGCTGCTTGT GGCCGATATA GACCGGGGAG GGGTGTTTGC CCAGGTTGTC
GGGACGCTGG CGGTTATTCC TCCGGAAGAT CGCGCACTGG TGAAGGGTGT TATCGTAAAC
CGGTTCCGCG GAGATATCGA CCTGTTCCGC GACGGGGTGA GGATGCTCGA GGAGATGACC
GGCGTGCCGG TGCTCGGAGT CATTCCGTAT TTCAGGGGTT TTTCCATCGA CGCCGAAGAT
GCCGTGCCGC TCGCCTCGAA GGTTGATCCC CATGCCGAGC CGGAAGCGGG CAGGACCGGT
GTGGCAGCGA TCTACTTTCC TCATATATCG AACTTCACCG ATCTTTCGCC GCTGGAGCAG
GATCCGGGCG TCGAACTGCA CTACCTGCAC TATCCCCGTT CGCTCGAGAA CTACAGGATG
CTGGTTCTGC CGGGTTCGAA GAACGTTCGG GGAGATCTCG AATGGCTCCG CAGGCTCGGC
TGGGAGGAGC GCATCAGGGA GTTCAGGGCG CGGGGAGGCG TTGTGGTGGG TGTGTGCGGA
GGTTACCAGA TGCTTGGCCG CACCATTGCC GATCCGTTCG GGGTAGAGGG GGAGCCGGGT
GCAAGTCCGG GTCTCGGTCT GCTTGATGCC GATACGGTGC TCGAACAGGA GAAATGCCTC
TGCAACGCTT CGGGCGTGCT TGAAGATGCG GGGGTGAAGA GCCACGGTTA CGAAATCCAT
ATGGGACGTA CATTGCTTTC CGGCGCCTGC CGACCATTCA TGCGGGTGCT CACGCGCAAT
GGCGAGGCTG CCGGCGACGG AGACGGGGCT CGGAGCGAGG ACGGAAAGGT GATCGGCACC
TATTTTCACG GTATTTTCGA TGAGCCTCAG GTGAGGCAGT GGTTTCTTGC GCTTGCCGAT
CCCGAGTACC GCCCGTCAAG GCATGAGTGC AGCATGGAGG AGAGTTACGA CCTTCTGGCC
GCGCATTTTA CGGAGCATCT CGATCTTGAA AAACTTTTCG GCCTGATCGA CAAACCGCTT
CCTGAAAGAT GA
|
|---|
| Protein sequence | MVSGRSKAIA VFGTASDVGK SVVATAICRI FRDAGIDVAP YKAQNMSNNS GVTPDGFEIG
RAQIAQAEAA RVVPTADMNP VLLKPNSDTG AQVVLQGKVC STESAKGYFR DTSLWAAAAR
ESLERLMKRY ELVVIEGAGS CAEMNLYQRD FVNFRTARES GASVLLVADI DRGGVFAQVV
GTLAVIPPED RALVKGVIVN RFRGDIDLFR DGVRMLEEMT GVPVLGVIPY FRGFSIDAED
AVPLASKVDP HAEPEAGRTG VAAIYFPHIS NFTDLSPLEQ DPGVELHYLH YPRSLENYRM
LVLPGSKNVR GDLEWLRRLG WEERIREFRA RGGVVVGVCG GYQMLGRTIA DPFGVEGEPG
ASPGLGLLDA DTVLEQEKCL CNASGVLEDA GVKSHGYEIH MGRTLLSGAC RPFMRVLTRN
GEAAGDGDGA RSEDGKVIGT YFHGIFDEPQ VRQWFLALAD PEYRPSRHEC SMEESYDLLA
AHFTEHLDLE KLFGLIDKPL PER
|
|---|
| |