| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1036 |
|---|
| Symbol | |
|---|
| ID | 6353738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1142237 |
|---|
| End bp | 1143250 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642668659 |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_001943090 |
|---|
| Protein GI | 189346561 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3621] Patatin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGATA GATTGGATTT CAAAATTCTT GCTATAGATG GTGGTGGAAT CAGAGGCCTC
TATACAGCCT GGATTCTTAA TGAGTTTGAG AGGGATATAA AAAAAATATA TGGCAGTGAT
ACTCTTATCG GAGATTGCGT CGATCTTGTT TGTGGTACTT CCACGGGTGG GCTGATTGCG
CTTGGAATCT CTCAAAGAAT CCCTATGAAT GAAATTGTTG ATTTGTATTT AAAAAGTGGG
CCAATAATCT TTAATGGCTC GCAATCGCTG ATAAAAAAGC TTAGACAGGT ATTCTGGGGA
GGCAAATACA AAAATGTTGA ACTTAAGATG CACCTTGACA GGATTTTTGA TCAAAAAAAG
ATAGGTGATG GGCGGAATCT TCTTTGCATA CCATCGTATG ATTTTACCAA TGGTACATAT
GAAGTTTTTA AATTCGATCA CACAGAGGGA AATCTAAGTC GACATAATAA TCTTAAGGTA
ACCGATGTTG CTTTGGCAAC GTCAGCTGCA CCCACATACT TTCCTGTCTC TAGTATTGAA
CTAGAAGGGA ATAGGTTATT TATTGATGGG GGAGTCTGGA GTAATAACCC ATCAATGGTT
GGCTATTTGG AGGCGATTAG ATATTTTGTA GGGAAGAATA GAAAATATAA TGTTATAAAA
ATGATGTCTA TTTCTTCCTT GCCTGTACGG TCTGGTATCA AACCAGGGGC AAAACTAAAT
AGAAGTGTTC TGGATTGGCG CTCGAAAATT TTTGATATAA GTATAACAGG TCAAAGTGAA
TTTGCTCATA TTTTCATGAA TAACATAAAA CAGATTTCTG ATGGCATTGT CAAATATCAT
CGAATAACAA AGGTTGTTGA TATTCCTGAG CATATTGAAA TACTGTCATT AGATAATGCT
ACAAAGCCAG CAATAGACCT TCTGTTGCAG TACGCGCAAG ATACTTATCA TATTCATAGG
CATAAAGATT TCGTAAAAGA TTATTGGGGA TCCATGAAAA GCTATAATAT ATAA
|
|---|
| Protein sequence | MRDRLDFKIL AIDGGGIRGL YTAWILNEFE RDIKKIYGSD TLIGDCVDLV CGTSTGGLIA
LGISQRIPMN EIVDLYLKSG PIIFNGSQSL IKKLRQVFWG GKYKNVELKM HLDRIFDQKK
IGDGRNLLCI PSYDFTNGTY EVFKFDHTEG NLSRHNNLKV TDVALATSAA PTYFPVSSIE
LEGNRLFIDG GVWSNNPSMV GYLEAIRYFV GKNRKYNVIK MMSISSLPVR SGIKPGAKLN
RSVLDWRSKI FDISITGQSE FAHIFMNNIK QISDGIVKYH RITKVVDIPE HIEILSLDNA
TKPAIDLLLQ YAQDTYHIHR HKDFVKDYWG SMKSYNI
|
|---|
| |