| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0965 |
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| Symbol | |
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| ID | 6355414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1056063 |
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| End bp | 1057775 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642668589 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001943020 |
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| Protein GI | 189346491 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGTTGT CTGCTCATAA CCCGGTTCAC TGCGCAATTG CAAGAGAGTC CAGGTCGAGT
GACGGTTTTC AGTCCGGAAA ATCGTCGGTA GCCGAAATTC TTGACAGTCT TGTGTATGCG
ACCTATTTCA AGGATGAGTA TTTTTCCACT TCATCGAAAA TGCCCGACAG GCCGGGTTTC
CCTTCCCATT TCGTTCCGCA GTACAGCGAT TCGGTCTATG CCGCACGAAT AGCCGTTTTA
GATCGTAAAA CACCGTTCAA TCTTGTTTAT AACGAACACG TCAGAGGTTT TATCAGGGTT
TATGCTGTTG ACAAACGGAA CAGCACCGCG AAGATTCTTG GTTTGACCAA GGTCTATTTT
CCTCTTTTTG AAGAGCAGCT GGACAAGTAT AACGTCCCTC TTGAAATGAA GTATCTGGCC
ATCGTCGAAT CGGCTCTCAA TCCTACGGCA GTCTCCCATG CCGGAGCGAA AGGATTGTGG
CAGTTCATGT ACGGCACCGG TAAAATGTAC GGACTCGAGT CTTCGTCGTT TGTTGAAGAC
CGTTATGATC CCTATAAGGC CACGCTCGCT GCAAGTCGCC ATCTTCGCGA TCTCTACAAT
ATCTACGGAG ACTGGTTTCT TGCCCTTGCG GCATACAACT CCGGACCAGG AAATGTCAAC
AAGGCGATCA GACGGGCCGG CGGAGTAAAG AATTACTGGG CGATCTGGGA CTATCTTCCT
GCAGAGACAC GAGGCTATGT TCCGGCATTC ATTGCCGTGA ACTACATCAT GAACTATTAT
AAGGAACATA ATATTCGTCC TGTCGAGCCG GGATACCTCT ATCACGATAT CGATACGCTG
CGGGTATCGA AGATGCTGTC GTTCGAACAG ATCAATGAGA CTATCGGCGT TCCCAGGCAG
GATCTTGAAT TTCTCAATCC ACAGTATAAA CTCGGCATTA TACCCGGATC CGATTATTCA
TCGAACGTGC TCAGGCTTCC GCGCAGATAT ATCGGACCGT TCCAGAAGCG CGAGAAAGAA
ATCTATGCAT ACAAGTCGAA AAGCATACTG GAACGGGAAC AGCTTCTTGC AAGGGTGCAG
AGTTTCGAGT CCGCTTCGCC TTCTCCGGTG AGCCAGACGT CGGGAGACGG TCAGGTTCGG
AAAGTTCACT ATGTGCGTCA GGGACAGGAC TTGGGGATGA TTGCCCGTTT TTACCGGTGT
GAAGTCAGTG AAATCGTTCG CTGGAATAGT CTGAAAACTC AAAATGTTAC CCCTGGTCAG
CAGCTGGTTG TTTTTGCCGG AAATGATGGT TCCGTTCAGA CTTCGGCGGT AAGCCCGCCG
CCGGTTCCGA AAGAGGCTTA TCAGGAAAAA AAGGTTGAAC GGAAGAAGGA AAAATCCGAA
ACGCACCGGG TTGAAAGAGG GGAGACGGTC GCATCTATTG CCAGACAGTT CGGAGTGAGC
GTCGAGAGCA TTGCCGATCT CAACGGCTTG AGGGGTAATA TGAGCATTAC GCCCGGTCAG
AAGCTGAAAA TTACCGGGTC TTCATCCGAA AAATCCGTAT CCAAAAAACA GGTGTCGCCA
AAGGCTACAT ATCATAAGGT CAGAAAAGGA GAGACGCTTT ATTCTATTGC CGACCGTTAC
GGTGTGAGTG TCGGCGATCT TACGGACTGG AACGATATCG GCAGGAAAAA GTCACTGCGG
CCGGGCCAGA AGCTCAAGGT CGCTTCCATG TGA
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| Protein sequence | MLLSAHNPVH CAIARESRSS DGFQSGKSSV AEILDSLVYA TYFKDEYFST SSKMPDRPGF
PSHFVPQYSD SVYAARIAVL DRKTPFNLVY NEHVRGFIRV YAVDKRNSTA KILGLTKVYF
PLFEEQLDKY NVPLEMKYLA IVESALNPTA VSHAGAKGLW QFMYGTGKMY GLESSSFVED
RYDPYKATLA ASRHLRDLYN IYGDWFLALA AYNSGPGNVN KAIRRAGGVK NYWAIWDYLP
AETRGYVPAF IAVNYIMNYY KEHNIRPVEP GYLYHDIDTL RVSKMLSFEQ INETIGVPRQ
DLEFLNPQYK LGIIPGSDYS SNVLRLPRRY IGPFQKREKE IYAYKSKSIL EREQLLARVQ
SFESASPSPV SQTSGDGQVR KVHYVRQGQD LGMIARFYRC EVSEIVRWNS LKTQNVTPGQ
QLVVFAGNDG SVQTSAVSPP PVPKEAYQEK KVERKKEKSE THRVERGETV ASIARQFGVS
VESIADLNGL RGNMSITPGQ KLKITGSSSE KSVSKKQVSP KATYHKVRKG ETLYSIADRY
GVSVGDLTDW NDIGRKKSLR PGQKLKVASM
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