| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0958 |
|---|
| Symbol | |
|---|
| ID | 6355407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1047996 |
|---|
| End bp | 1048592 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642668582 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001943013 |
|---|
| Protein GI | 189346484 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT CGGTATCGTC CCGCAAGGAG CTGACCATTC TGAAACTCGA AGAAGAAGTC
TTCGATTTCC GTCACTCCGC ATGTTTCCGC CAAACAATCG AAACCCTGCT GCTACAGGAA
AACAGCAGAA ATCTCATTAT CGATTTTTCG CAGGTCAAGG CCATCGACTC GAGCGGAATC
AGTTCGATGC TCATTGCCCA CCAGCTCTCG AATCAATGTC ATGGTCTGGC CATTTTCGTC
TCGCTCTGCC AGCAAATCAA AGACCTGCTC AAACTCACCA ATCTCGACAA ACAGCTCTAT
ATTTTCTCAT CCATCAACGA AGTCATGACC CTTGTTGAAC CCGCCATGAA AAACAAGCGG
GCAGGCAGAG GAAAATCTCA GGTTCATGTC GATGAAGTTA TTGACGATAT CTGTGACGAC
CTTGCCCTGC TCGACGATGC AATGATCCCC GTTGACAATC TTGACGCCGT GATAAACGAA
GAAGCGCCTG AAAACGAAGA TCTCGCAGAA TCCGAAGGTG ATGAAGAACA TCCCCTCCCC
CAGAAAAAAC GGGGAAGGCC GAAAAAGCCG AAACCAGGAA AAAACAGCAA CGGATAA
|
|---|
| Protein sequence | MKNSVSSRKE LTILKLEEEV FDFRHSACFR QTIETLLLQE NSRNLIIDFS QVKAIDSSGI
SSMLIAHQLS NQCHGLAIFV SLCQQIKDLL KLTNLDKQLY IFSSINEVMT LVEPAMKNKR
AGRGKSQVHV DEVIDDICDD LALLDDAMIP VDNLDAVINE EAPENEDLAE SEGDEEHPLP
QKKRGRPKKP KPGKNSNG
|
|---|
| |