Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0947 |
Symbol | |
ID | 6355396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1035843 |
End bp | 1038065 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642668571 |
Product | helicase, RecD/TraA family |
Protein accession | YP_001943002 |
Protein GI | 189346473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAC CATCTTCAGA TACCGAAAAC AACGCTGAAC GCGAACTCCG GCAGGAAACG GTTACCGGCA CCGTTGAACG GGTAACCTAC CATAACGAGG AGAACGGATT TTCCGTGCTT AAAATCAGGG CGAGAGGCAG TCGGGATGCC GTGACGGTTG TGGGCAACAG TCCGGCAATA TCTCCCGGAG AGTTTATAAC CTGCACGGGA AGCTGGCAGA ACAACCGCAC CCACGGCCTG CAGTTCAAGG CCGACGGGAT CGACATCATT CAGCCGACAA CGGCCGACGG CATCGAAAAA TACCTTGCAT CCGGCATGGT CAAGGGCGTC GGGTCGTTCT ACGCAAAAAA ACTGGTCAAG AAATTCGGAA CCGGCGTACT CGACATACTC GACAGCAATC CCGAACGGCT GCTTGAAATA GAGGGCATCG GGAGAAAAAG GCTGGAGCTG ATCACGAAAT CCTGGGAGGA GCAGAAAGCC ATCCGGGAAA TCATGGTTTT TCTGCAGTCG CACGGAGTCG GTATCGCCCG GGCGTTCAGG ATCTATAAAA CCTATCGCCA GGATGCCATC AAAAAGGTTT CCGAAAACCC CTACAGCCTC TCCCTCGATA TTGACGGCAT CGGCTTTCTC ACCGCCGACA CCATCGCCTC GAAGCTCGGC ATAGCTCACG ACTCGCTCAT CAGGGCCGAA GCCGGAGTGC GCCATGTTCT GCAGGAACTG GCCTCCAGCG GCCACTGCGC CGTGCCCAAA GAGCGGCTGG TGCAGGAATC GGCCGCCATG CTCGACATCT CCGCTCCGAT CGTGGAAGAA GCCATTGCCG TGGAAACCGG CAAGTTCAAT CTGGTGCGCG AAACCATTGA CGGAGCAGAG ATCTTTTATC TCGCGCCGCT CCACCGCGCC GAAGAAAAGA CCGCCGCGGC GCTCGCCGCT CTCCTGCGGG GGAGGACGCC ATGGAAAGGG ATCGATCTGC AAAAAGCCGT GGTGCAGATT GCCGAAGAGA CCGGCCTGCA ACTCTCCCCT TCCCAGAAAG AGGCACTTGC GCTTGTCCTC ACGAACAAAG CCACCGTCAT TACCGGAGGC CCCGGTGTCG GCAAAACGAC GCTCGTGAAC GCCATTCTCA GGGTCATCCG AAAAAAAACC ACCAAAATCC TGCTCTGCGC CCCTACCGGC CGGGCGGCAA AACGGCTCTC GGAATCGACC GGTATGGAAG CGAAGACCAT TCACCGCCTG CTTGAATTCG ATCCCAACAG CGGCGGCTTC AAACGCAGCT CCGGAAACCC GCTCGAAGCG GATATGGTGG TCGTCGACGA AACCTCGATG GTCGATATCG TGCTGATGAG CAAGCTCCTC TCTGCGGTTC CGGCAAAAGC CGCCCTGCTG CTTGTGGGTG ATGCCGACCA GCTCCCTTCC GTGGGCCCTG GTGCGGTACT TACCGACATC ATCGCATCCG ATGCGGTTCC TGTAGTACGG CTGACCGAAA TTTTCCGGCA GGCGGCCCGG TCGCAGATCA TCGTCAACGC CCACCGCATC AACAACGGCG AAATCCCGCG CAACGCCGAA GGCGAAGAAC TGTCGGATTT CTATGTGGTG AACTCGCAGA CACCCGAAAA TATCCATGCC AAGCTCATGC AGATGGTAAC CGAACGCATC CCGGCCCGCT TCGGTTTTCA TCCGGTGCGC GACATTCAGG TGCTCACCCC GATGAACCGG GGCGGGCTCG GTTCGCGTGC CCTGAACGCC GAACTGCAGA AAGCGCTCAA CGGCAGCGCC GAGCCGAAAG TATCGCGCTT CGGCTCCATC TTTTCGCCGG GCGACAAGGT TATCCAGATG GTCAACAACT ACGACAAGGA GGTCTTCAAC GGCGACATCG GCGCCATAAC GGCAATCGAC ACCGAAGAGA GCGAGCTGAC GGTCGATTTC GACAAACGGC CCGTACGCTA CGAGTTCAGC GAACTCGATG AACTCGCGCT GGCCTACGCC ACAAGCATTC ACAAAAGCCA GGGCTCCGAA TATCTCGCCG TCGTCATTCC GCTCGCCATG CAGCACTTTA CGCTGCTCGA GCGGAACCTG ATTTACACCG CCGTCACGCG GGGAAAAAAG CTTGTGGTCA TCATTGCGCA GCCAAAGGCC CTCGCTCTTG CAGTAACAAA CAGAAAAGCC GACCGCCGCA TGACCACGCT CGCCCTTAAA CTGACGGAAG CCGCAGGAAA CCCGAACCCC TGA
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Protein sequence | MATPSSDTEN NAERELRQET VTGTVERVTY HNEENGFSVL KIRARGSRDA VTVVGNSPAI SPGEFITCTG SWQNNRTHGL QFKADGIDII QPTTADGIEK YLASGMVKGV GSFYAKKLVK KFGTGVLDIL DSNPERLLEI EGIGRKRLEL ITKSWEEQKA IREIMVFLQS HGVGIARAFR IYKTYRQDAI KKVSENPYSL SLDIDGIGFL TADTIASKLG IAHDSLIRAE AGVRHVLQEL ASSGHCAVPK ERLVQESAAM LDISAPIVEE AIAVETGKFN LVRETIDGAE IFYLAPLHRA EEKTAAALAA LLRGRTPWKG IDLQKAVVQI AEETGLQLSP SQKEALALVL TNKATVITGG PGVGKTTLVN AILRVIRKKT TKILLCAPTG RAAKRLSEST GMEAKTIHRL LEFDPNSGGF KRSSGNPLEA DMVVVDETSM VDIVLMSKLL SAVPAKAALL LVGDADQLPS VGPGAVLTDI IASDAVPVVR LTEIFRQAAR SQIIVNAHRI NNGEIPRNAE GEELSDFYVV NSQTPENIHA KLMQMVTERI PARFGFHPVR DIQVLTPMNR GGLGSRALNA ELQKALNGSA EPKVSRFGSI FSPGDKVIQM VNNYDKEVFN GDIGAITAID TEESELTVDF DKRPVRYEFS ELDELALAYA TSIHKSQGSE YLAVVIPLAM QHFTLLERNL IYTAVTRGKK LVVIIAQPKA LALAVTNRKA DRRMTTLALK LTEAAGNPNP
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