Gene Clim_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0947 
Symbol 
ID6355396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1035843 
End bp1038065 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content58% 
IMG OID642668571 
Producthelicase, RecD/TraA family 
Protein accessionYP_001943002 
Protein GI189346473 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAC CATCTTCAGA TACCGAAAAC AACGCTGAAC GCGAACTCCG GCAGGAAACG 
GTTACCGGCA CCGTTGAACG GGTAACCTAC CATAACGAGG AGAACGGATT TTCCGTGCTT
AAAATCAGGG CGAGAGGCAG TCGGGATGCC GTGACGGTTG TGGGCAACAG TCCGGCAATA
TCTCCCGGAG AGTTTATAAC CTGCACGGGA AGCTGGCAGA ACAACCGCAC CCACGGCCTG
CAGTTCAAGG CCGACGGGAT CGACATCATT CAGCCGACAA CGGCCGACGG CATCGAAAAA
TACCTTGCAT CCGGCATGGT CAAGGGCGTC GGGTCGTTCT ACGCAAAAAA ACTGGTCAAG
AAATTCGGAA CCGGCGTACT CGACATACTC GACAGCAATC CCGAACGGCT GCTTGAAATA
GAGGGCATCG GGAGAAAAAG GCTGGAGCTG ATCACGAAAT CCTGGGAGGA GCAGAAAGCC
ATCCGGGAAA TCATGGTTTT TCTGCAGTCG CACGGAGTCG GTATCGCCCG GGCGTTCAGG
ATCTATAAAA CCTATCGCCA GGATGCCATC AAAAAGGTTT CCGAAAACCC CTACAGCCTC
TCCCTCGATA TTGACGGCAT CGGCTTTCTC ACCGCCGACA CCATCGCCTC GAAGCTCGGC
ATAGCTCACG ACTCGCTCAT CAGGGCCGAA GCCGGAGTGC GCCATGTTCT GCAGGAACTG
GCCTCCAGCG GCCACTGCGC CGTGCCCAAA GAGCGGCTGG TGCAGGAATC GGCCGCCATG
CTCGACATCT CCGCTCCGAT CGTGGAAGAA GCCATTGCCG TGGAAACCGG CAAGTTCAAT
CTGGTGCGCG AAACCATTGA CGGAGCAGAG ATCTTTTATC TCGCGCCGCT CCACCGCGCC
GAAGAAAAGA CCGCCGCGGC GCTCGCCGCT CTCCTGCGGG GGAGGACGCC ATGGAAAGGG
ATCGATCTGC AAAAAGCCGT GGTGCAGATT GCCGAAGAGA CCGGCCTGCA ACTCTCCCCT
TCCCAGAAAG AGGCACTTGC GCTTGTCCTC ACGAACAAAG CCACCGTCAT TACCGGAGGC
CCCGGTGTCG GCAAAACGAC GCTCGTGAAC GCCATTCTCA GGGTCATCCG AAAAAAAACC
ACCAAAATCC TGCTCTGCGC CCCTACCGGC CGGGCGGCAA AACGGCTCTC GGAATCGACC
GGTATGGAAG CGAAGACCAT TCACCGCCTG CTTGAATTCG ATCCCAACAG CGGCGGCTTC
AAACGCAGCT CCGGAAACCC GCTCGAAGCG GATATGGTGG TCGTCGACGA AACCTCGATG
GTCGATATCG TGCTGATGAG CAAGCTCCTC TCTGCGGTTC CGGCAAAAGC CGCCCTGCTG
CTTGTGGGTG ATGCCGACCA GCTCCCTTCC GTGGGCCCTG GTGCGGTACT TACCGACATC
ATCGCATCCG ATGCGGTTCC TGTAGTACGG CTGACCGAAA TTTTCCGGCA GGCGGCCCGG
TCGCAGATCA TCGTCAACGC CCACCGCATC AACAACGGCG AAATCCCGCG CAACGCCGAA
GGCGAAGAAC TGTCGGATTT CTATGTGGTG AACTCGCAGA CACCCGAAAA TATCCATGCC
AAGCTCATGC AGATGGTAAC CGAACGCATC CCGGCCCGCT TCGGTTTTCA TCCGGTGCGC
GACATTCAGG TGCTCACCCC GATGAACCGG GGCGGGCTCG GTTCGCGTGC CCTGAACGCC
GAACTGCAGA AAGCGCTCAA CGGCAGCGCC GAGCCGAAAG TATCGCGCTT CGGCTCCATC
TTTTCGCCGG GCGACAAGGT TATCCAGATG GTCAACAACT ACGACAAGGA GGTCTTCAAC
GGCGACATCG GCGCCATAAC GGCAATCGAC ACCGAAGAGA GCGAGCTGAC GGTCGATTTC
GACAAACGGC CCGTACGCTA CGAGTTCAGC GAACTCGATG AACTCGCGCT GGCCTACGCC
ACAAGCATTC ACAAAAGCCA GGGCTCCGAA TATCTCGCCG TCGTCATTCC GCTCGCCATG
CAGCACTTTA CGCTGCTCGA GCGGAACCTG ATTTACACCG CCGTCACGCG GGGAAAAAAG
CTTGTGGTCA TCATTGCGCA GCCAAAGGCC CTCGCTCTTG CAGTAACAAA CAGAAAAGCC
GACCGCCGCA TGACCACGCT CGCCCTTAAA CTGACGGAAG CCGCAGGAAA CCCGAACCCC
TGA
 
Protein sequence
MATPSSDTEN NAERELRQET VTGTVERVTY HNEENGFSVL KIRARGSRDA VTVVGNSPAI 
SPGEFITCTG SWQNNRTHGL QFKADGIDII QPTTADGIEK YLASGMVKGV GSFYAKKLVK
KFGTGVLDIL DSNPERLLEI EGIGRKRLEL ITKSWEEQKA IREIMVFLQS HGVGIARAFR
IYKTYRQDAI KKVSENPYSL SLDIDGIGFL TADTIASKLG IAHDSLIRAE AGVRHVLQEL
ASSGHCAVPK ERLVQESAAM LDISAPIVEE AIAVETGKFN LVRETIDGAE IFYLAPLHRA
EEKTAAALAA LLRGRTPWKG IDLQKAVVQI AEETGLQLSP SQKEALALVL TNKATVITGG
PGVGKTTLVN AILRVIRKKT TKILLCAPTG RAAKRLSEST GMEAKTIHRL LEFDPNSGGF
KRSSGNPLEA DMVVVDETSM VDIVLMSKLL SAVPAKAALL LVGDADQLPS VGPGAVLTDI
IASDAVPVVR LTEIFRQAAR SQIIVNAHRI NNGEIPRNAE GEELSDFYVV NSQTPENIHA
KLMQMVTERI PARFGFHPVR DIQVLTPMNR GGLGSRALNA ELQKALNGSA EPKVSRFGSI
FSPGDKVIQM VNNYDKEVFN GDIGAITAID TEESELTVDF DKRPVRYEFS ELDELALAYA
TSIHKSQGSE YLAVVIPLAM QHFTLLERNL IYTAVTRGKK LVVIIAQPKA LALAVTNRKA
DRRMTTLALK LTEAAGNPNP