| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0937 |
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| Symbol | |
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| ID | 6354174 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1026429 |
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| End bp | 1031194 |
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| Gene Length | 4766 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 642924220 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.544961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATAA CCCTTGAACT ATCTCACCGC AATCCGTCGA TAACGCTGCC GATTAATAAC
TCTTATCTGC TTTCCTCACT CATCTACAAC ATTGTCGATA AAAGCTCAAG CGAGTATGCC
GAGCGCCTGC ATGCGGAAGG GTACCGGTTA CAGAACAGGG CGTTCAAGCT TTTTACCTTT
TCGCCGCTGT ACACGGCCAA CCGGCGGAAG TGGGAGATGC ATGGGGATGG AAACATGAGC
ACGAGGGAGC GGCTGCTGCA TCTGACGATA TCTTCTCCGA AAAGCGAGTT CATCGAGCAT
CTGGTGGTTG GGCTGATGCA TGAACCGTTT GTTTTTGTAG GGAAGGAGCG GTTCAGGGTG
GAGACCGTCC GGCGGCTGGA CAATCCTGTC CTATCCGGCG ATATGCGCTT TATTGCCCTT
TCGCCCATTG TTTGTGCCAC GAAGCGTGAT GCCGACCACT ACGCGCAGTA TCTTTTTCCC
GGCGATGAAG ATTTCGAACG GGTGCTGTGA TCGGAAAACA AGAATAAGCC AAAAACGGAA
AATAAGAATC ACCCAGGGTT AGCGTAAAAA ACACCCATAG CTCGTAGTTT GAAGGTGCCA
ACCAAATCAA ACCCCAGAGC TATGAGGACA CAGTTAAAAA AGCTAACCAT GTACAACAAA
GTTAAGGAAT TTGCCCGAGA AGGATTAAGC ATCCGTCAAA TCAGCCGAAA GACGGGCATG
GACAGAGTGA CGGTGCGCAA GTTTCTCCGC ATGACCGATG AGGAATTCAG TGCGTTTCTT
GCTCTGCAGA AGCGGCGCCT GCGAAAATTG CAGCCTTATG AACAGTTCGT CAAGGATAGG
GTTACCGACT ATCCTGACTG CAGTGCAACT CAAGTTGAAG ACTGGCTGAA GGAGCATCAC
CCGGACTTTC CAGAGGTAAC GACTCGAACG ATCTATTCTT TTGTCCAGTG GATCCGAAAA
ACCTATGATC TTCCAAAACC GAAAGGAACC CCTCGTGCCT ATCATCCGGT CGAGCAACTT
CCTTACGGAG AGCAGGCGCA GGTTGATTTC GGTGAGTACT GGATGGCGAG TGCTGATGAA
CACAACGTGA AGGTTCACTT CATGATTATG CTGCTCTCCC GAAGCCGCAG GAAGTTTGTC
AGCTTCAGCC AGCAACCGAT TACGACCCGT TTTGTGCTTG AAGCTCATGA ACAGGCATTT
GCCTTTTTTG AGGGCATACC GCACACACTG GTTTATGATC AGGACTCAAC CATTGTTTCC
GATGAGAACC GGGGTGCCAT CCTTTATACG GAGGCGTTCA GGAAGTACCT GTTGCACCGC
AGTCTGAAGA TCCATCTCTG TCGGAAAAGC GATCCGGAAA GCAAAGGGAA AATCGAAGCC
GGCGTCAAAT ATGTGAAGTA CAACTTCCTG CCGGGGCGAC GCTTCGTCAA TCTTGAAGTC
CTGAACCAGG AAGCGTTGCT CTGTGTAGTG GCCCCCGATT TTCAGACAAC GGTTTAAGGT
GGTAACTTGC CCAAAAAAGG GACAAGTTAT GAGCGAAAAG CAACGCAAAA GTTTTACGGC
ACAATTCAAG GCCAAAGTGG CGCTTGAGGC AATCAGGGGC GAGAAAACCC TGAACGAGAT
CGGTCGGGAA TTTGGTATCC ACCCGAATCT GGTTGGGCAA TGGAAGCGTG AGGTTCAAGA
GCATGCGGCC GGTCTCTTTG AGGCCAAGCG CGGCCCGAAG CCGGTCGATC CACTTGCAGA
TCCGGAAAAG CTTTATGCTG AAATAGGTCG GCTCAAAGTT GAGTTGAATT GGCTCAAAAA
AAAAGTCGAT CCGTACCTAT GAAAGCGCGT AAAAACTGGA TCAGCGACAA AGAACAGTTG
TCGGTATCTA CCCAATGTGA ACTTGCCGGA GTAACCCGGT CAGGGTACTA CGGGCAAAGT
AAAAGCCTCA TGCCAAATAC TGAAGATCTG GAACTGATGA AGCTTATCGA CGAGGAGTAC
ACCCGACATC CGTTTTATGG AAGCCGACGG ATGAAGCAGG TCCTGCTCAC CCAAGGGCGC
AAGGTCAACC GGAAACGAGT ACAGCGCCTG ATGCGTAACC TGGGGCTTGC GGGTATGGCT
CCAGGGCCCA ATACCAGCAA ACCGCATCCG CAGCACAAGA TCTATCCATA CCTGTTGCGA
GGTCTTTCCA TTACCAGACC GAACCATGTC TGGTCTACCG ATGTGACCTA TTGCCGGTTA
CCCGGCGGCT TCATGTATCT GACGGCCGTC ATCGACTGGT ATTCCCGCAA GGTGCTGGCA
TGGAGGCTTT CGAATTCCCT GGATAGCAGC TACTGTGTTG ATTGTCTGGA AGAAGCTATC
CGCAAGTACG GAACGCCGGA AATCTTCAAC ACCGATCAGG GCGTTCAGTA CACCAGTGAT
GCGTTCACCA GCGTGCTCAA GAGCCATGAG ATCCGCATCA GCATGGATGG CCGTGGCCGG
GCCCTGGACA ATGTTTTCGT CGAGCGGTTA TGGCGGAATG TCAAGCAGGA AGACCTGTAC
CTGAAAGGCT ATGAAACAGC GGTAGAAATG ATGCGGGGAT TCGCCGAATA TTTCCGTTTT
TACAATATCG AGCGGCCTCA TCAGTCGCTG GGGTACAAAA CCCCGGACGA GGTGTATGAA
AGCGCCATAG GAGGCGGAGC ACGCATTGTC GACAAGTTCT CTAAGAGTGT CTCCGAAGGG
TCGTCGGAGG CTACAGGGCC GCAACAGGAA GCGGCATAAA CAACCGGCGG GTTGCCACCT
TAAATACGAC CTTATTTTGT CTGGTCGATA GGGTCCACTT CACTGGCTTG AACGAACGGC
CAATGCCAAA GAACATGCCA CAACGCGGCT GATACCTGAG GCAGAATGGC AGGTGGAAAA
ACAGCATCTT CGTCCTTTTG AGCCCTTACC CTATCCGATT TCCGGGCCTG TCGGTAAAGA
GTACCATGTA CGCAAAGACA ACACAATCTC GTATCGAGGG AATTTCTATA GCCTGCCGGT
CGGCACCTAT GCAGGGCCGG GGACACTGGT TGTGCTGGAA GTCAGGCAGA ACACCCTTTG
TCTCTATGCT CATGACGGCA GGTTGCTGGC CAATCACCCG ATTAAGAGCG GCAAAGGTAC
CGTGGTGGTC AACAACCACC ACCGACGCGA TACTTCCGCC AAACGGCGAG AGTTGCAGGA
CTCGCTCAAG CCGCTTTTCA CCAATCAGGA ACAGGCGGAA CTGTTTCTTG AAAGCATCCA
CAACCGTTAT CCCCGGTACA GTCGGGACCA GTTCCTGCAT GTACGCAATA CCATCAGCGG
ATGCCGGCAG AAGCTGATAG ATGAGGCCCT CGCATACTGT GTCGATCATC ATCTCTTTTC
ATCCGGTGAG TTCCATGATA TCCTGCACCA TTACCGAAAG CGGGAAGAAA AACAGAGTCA
TCCGACGGTC TCCAACACCT TCCGCCCGAA AACACGCCGA AGCGACCTGA ACAGGATGCT
CTCGTTCGTG CCGGACAGCA GTACCATAAC CACCTATGAA ACCATTTTCA GCTGTTAACC
ATGGAAAGAA CCATTACCAC CATACAGGAA CACGCCCGGG AACTCAACCT CACCGGGCTG
GCAGGAAGCG TAGATCTCCT GCTCGAAGAA GCGCGCAAAA GCGAACCATC CTATAGCGAT
TTTGCGCTGA CCCTGCTCGA AACTGAAATC TCCTGCCGAC GGAAAGCTCA TCTTGAACGG
CGCCGGAAAG CAGCCAACCT GCCGTTGCTC CATGACCTTG ATCATTATGA CTCGGGAGTG
CAGAACGGGA TCAGCCAAGT CCAGCTCCGG CAGTTACGGC AACTCCTCTG GCTCGACCAG
AACTACAACC TGATCCTTAT CGGGCCAAGC GGCACCGGCA AAAGCTATCT TGCCGGCGGG
CTCTGCCATG AAGCCCTCAA ACTCGGTTAT CACGCACTGT TCCGGACTAT GGATGAACTC
ATCCAGACCA TCAGGTTCAA AGATGTTACA ACGGCGGCTG CAAGGGAGTA CAAGCGATTA
GTGCATGCGC ACCTGCTGGT TATCGACGAT ATCATGATGT TCCCGATTGA AAAAAGTGTA
GCTGTCGGTC TGTTCCAGCT CATCAACCAG CTGCATGAAC AGACATCATT CATCATTACC
ACCAACAAAA ATCCGAAAGA GTGGGCAGAG ATGCTTGGCG ACGAGGTTCT TGCTACGGCG
CTGCTTGATC GGCTGCTCTA CAAATGCGAA GTCATCAAAC TTACCGGTAA AAGCTACCGG
CTCGAACACC GTACAACCAT CTTCGAACAA CAGCAACCGG CGGAAGGAGG CGCCACACGC
AAAAAAAGCA ACTATCGCTT CAAAAAGTCG TAGTAGATCA TGCCGAATTG ACGTAATTTA
AAGCCGCTGC CTGGGTGATT GCTAATTTCC GAAATTGGCT GATTTTATAT TTCCGACTAC
AGGTGCTCCA GGAGAACCTC TGCCGCAAGT ACGAAGCGCT TCACGGCAGG CCGTACGCTG
CAGACAACAG CACCTTCCGC TTCACGCTCG ATCACGACTA CGCGGATCGC AAAAACGGCA
AGATTCAGAA GCTCATCACC ATCAAGGAGG GCCGGCCCGA CGAAACCAAA GTGAAAGGTC
TGCTTGCTCC TTTTCGGCTT GAAGCTCCCT TGGAGCTGAT GGAGGTGGGC TACGAATGCG
GCTTTGGCGA AAGGAATTCG CAGGGGTTCG GGATGGTGAA GGTTGATGAA GATTGTGGGG
GGAAGTCGGT AGCCAGTAGC CAGTAG
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| Protein sequence | |
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