| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0877 |
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| Symbol | |
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| ID | 6354112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 959522 |
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| End bp | 960904 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642668502 |
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| Product | Carotene 7,8-desaturase |
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| Protein accession | YP_001942935 |
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| Protein GI | 189346406 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02731] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0378337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAG ATAAAAAAAC GGTATTGATT CTCGGCGGCG GTCTTGCCGG CCTGACGGCT
GCCAAGCGAC TGACCGACAG GGGATTCCAG GCAAAGATTC TTGAAAAGAG GGAAATATAC
GGAGGCAAAG TATCGTCATG GAAAGATGAG GAGGGTGACT GGATCGAGTC GGGGACGCAC
TGTTTTTTCG GCGCTTACGA TGTGCTCTAC GATCTTATGA AGGAGATCAA AACCTATCAT
GCCGTTCTCT GGAAGGAGCA TCAGCTGACC TATACGCTTC AGGGAGACAA GCGCTTCACC
TTCAATACCT GGGATCTGCC CAGTCCGCTG CATCTGCTTC CGGCAATTGT GAAAAACGGC
TACTTCACCT TCGGGGAGAT GGCTTCCTTT TCCCGATCCC TGATACCTCT GGCCTTGAAG
CAGTCAGCTT ATCCGCCTTC CCAGGATCAT CTCACCTTTG CTGAATGGGC CGTGCAGAAA
AAATTCGGCA ATCGTCTTAT GGACAAAATG TTTCGTCCGA TGGCTCTTGC CCTGAAATTC
ATTCCGCCTG AAGAGATATC TGCGAAGATC ATTCTCGATG TAACCGAAAC ATTCTATCGC
ATCCCCGATT CTTCACGTAT GGGTTTTCTC AAGGGAGCCC CCCAGGAGTA CCTGCATCAG
CCGCTGCTTG ACTATCTGAG TTCGCGCGGC ACGGCGTTCA AGAACCGCAC CTCTGTCGAT
GAGCTGCTCT ATGACGGAGG GGAGATCAAA GGTGTGCAGC TCAGGAATGG CGAAATTCTC
ACTGCCGACT ATTATCTTTC GGCCCTGCCC GTTCATAATC TCAACAAGGT GCTTCCTGCA
GCCCTGAAGC GCCATGACCG CTTTTTCGGT GGCCTTTCAA ATCTTGAAGG GGTACCGGTT
ATTTCAGTTC AGATATGGTA CGATCGGGAG ATCGTAACTG ACGACAACGT TCTGTTCAGT
CCGGATGGCA TTATACCGGT CTATGCCAAT CTTGCCCGTA CAACACCCGA GTACAGGACG
CTTCGCGGCG AGCCCTTTGA AGGTAAAACC CGTTTCGAGT TTTGTGTCGC TCCGGCCAGG
GAGCTGATGA GGCTTTCCAG AGAGGAGATT ATCCATCAGG TGGATCTCAG TGTCAGGGCC
TGCTACCCTC ATAAAACGCA CGGAGCAAGG ATACTGAAAG CAACGCTTGT GAAAATACCG
CACTCGGTGT ATGCTCCCTT ACCGAATATG GAGCAGTTCC GTCCGACCCA ACAGACTCCG
GTTCGCAATC TTTTTCTCGC CGGCGGGTTC TCCCGGCAAT TGTATTACGA TTCCATGGGT
GGCGCGGTTA TGAGTGCAAA TCTTGCTGCC GAAGGGATTG TCAAGGCGGA AGGATTGGAG
TGA
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| Protein sequence | MSTDKKTVLI LGGGLAGLTA AKRLTDRGFQ AKILEKREIY GGKVSSWKDE EGDWIESGTH
CFFGAYDVLY DLMKEIKTYH AVLWKEHQLT YTLQGDKRFT FNTWDLPSPL HLLPAIVKNG
YFTFGEMASF SRSLIPLALK QSAYPPSQDH LTFAEWAVQK KFGNRLMDKM FRPMALALKF
IPPEEISAKI ILDVTETFYR IPDSSRMGFL KGAPQEYLHQ PLLDYLSSRG TAFKNRTSVD
ELLYDGGEIK GVQLRNGEIL TADYYLSALP VHNLNKVLPA ALKRHDRFFG GLSNLEGVPV
ISVQIWYDRE IVTDDNVLFS PDGIIPVYAN LARTTPEYRT LRGEPFEGKT RFEFCVAPAR
ELMRLSREEI IHQVDLSVRA CYPHKTHGAR ILKATLVKIP HSVYAPLPNM EQFRPTQQTP
VRNLFLAGGF SRQLYYDSMG GAVMSANLAA EGIVKAEGLE
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