Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0658 |
Symbol | |
ID | 6354272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 731102 |
End bp | 731557 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642668286 |
Product | PilT protein domain protein |
Protein accession | YP_001942721 |
Protein GI | 189346192 |
COG category | [R] General function prediction only |
COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0680222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAGG TAGAGGCTGC CATAAGCCGG ATGATCGGGC ACAGGGTTTA TCTCGATACC AATGTTTTCG TCTACTTCCT CGACAGGAAC CCCGACTTTT TCCGGATCGT CAGTCCCATC GTTCAGGCTG TGGATGCAGG CAGAATAATC GGGGTTACCG GCGATGCCGC TATAGCGGAA ACGCTGGTGA AACCCTATCG AACAGGAAAC CTTGAACTCG TTTCAGCCGT CAAGGGATTT TTCAGTACCG AGGGGTTCCT CCTGATTCAG CCGCATGAGG GCGAAACCTT CGACCTTGCA GCTCAGCTCA GGGCACAACG GGGCATGCAA TTCATCGATG CATTGCATTA CGCAACGGCA ATCCGCTCGG GCTGCACCGT TTTCGTCACG AACGATCTGG CCATCCAGTC CGACCATATC ATCGAGATCA TCTCACTGAA AGCACTCCAT GGCTGA
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Protein sequence | MGKVEAAISR MIGHRVYLDT NVFVYFLDRN PDFFRIVSPI VQAVDAGRII GVTGDAAIAE TLVKPYRTGN LELVSAVKGF FSTEGFLLIQ PHEGETFDLA AQLRAQRGMQ FIDALHYATA IRSGCTVFVT NDLAIQSDHI IEIISLKALH G
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