| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0560 |
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| Symbol | |
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| ID | 6354911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 634497 |
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| End bp | 636329 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642668196 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001942631 |
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| Protein GI | 189346102 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA GAATCTCATT TTTCTGCGTT CTTCTGGCCT CACTCGCCGC ATGTCCTCTC
CCTTCTTGTG CCGCAGCTGA AACCGGAAAA AGTTCACCGG CGTCTGGCAC AACGCAAACG
CAGCATGCAA AACAGAACCC GGAGTTCGAT ATAGCCAAAG GGAAAAAGCT GTTTGCCGGA
AAAAATTACC CGGAAGCGCA AAAGGTGTTT GAAGGAATTC TGATCAACGA CAGCAATCCG
AAATCCAAAA GCGCTCATAC AGCCAGACTC TGGCTTGCAA AAGCCCTCTT CATGCAGCAG
AAACCCAAGG ACGCGTCCGA CCAGCTCGAC CTGCTGCTTA AAATCGCCCT TGATCCAGCA
ACCATTTATG AAGCCCATTT CGACCTTGCC GCCTGTCGGC TCAAACTCGG TCAGACCTTG
CCTGCTGCGC TCGATTATCT GAACGTCGGC ATCTCCGCAG CCCCTGTCGG GATGGAAAGG
GTTCGGGAAA CCGCTCTCGG GAACGCACGC CTCCTGGCAT GTACATCGCT CGATGCGAAT
GAGATTACGG CCCTGGAACG TGTAGCCAAA TCCCCCGATC ATCAGGCCTT CTTTTTCAAT
GAGCGCATGC AGAAGTATCT GCGGTCGAAC AATACGGGAA CCTTTAAAAG CTCCCTTCCC
CTTGCTGCAT CATTGATCGA CTCCCCATCG ATCAGTCCGC TTTACCGTCA GTTGCTTGAA
TCGCTGAAAA ACCAGGAAAA AGCGGTTGAC AACGGAACCA TGAAAGAACA GCGAATAGGC
GTCCTCCTTC CCCTTGAATT CCCGGTTTAC AGCCGGTCAT CAGTTCTGCC GGCAGGAAAC
CGTGTTTTCT ACGGACTGTA CAACCGGCAA TTGATGCATC AGATTACAAA ACCGGAACAG
CTGCTCAATA TGATGACGGT ATCGACTTCC GGAAACGAAA AGAACGATGC CTCTCTTGCG
GCAACGAAAC TGATCGAAGC GCATAAACCG GCAATCATTC TCGGACCGAT TTTCAGTGCC
GAAACCGTTG ATGCCTCGCA AGCGGTTAAA CATGCAAAAA TCCCGCTCCT TACGCCTACG
GCAACCGACA GACTGATCAC CGAAAACAAT CCCTGGTGTT TCCAGCTTAA TCCAACGCAT
GAGGAACGAG GCCGCATTGC CGCCAGAGAA CTGCTTAAAA CATCAAAACC GTCAGTCGCC
GCCGCTATAG CCGAAAAAAC GCCCTATCTT GAAGAGATGG CCAAGGGCTA TCTTGACGAG
ATGAAGCTTG CAGGCACGAA AACGATTATT TTTGCATCAT TGAGCGGTAC CGATGCAGAC
TCTTCGGTTT TCAGGCAGGC AACAGGTCTT CATTGGGGAA AAAACCTCGG CAGCCTCTAT
CTGCCCATGG ACAACCGGGA GGTTATCGAT AAAACGATCG GTCTGCTCAT CTCGTCAAAA
ACAGGGTATG ACCGGATTCT CGGGTCCGGC ATCTGGGGGG AACAGGATGT ATTCAACCGT
TTCAGGGCAA GGCTTCCGAA AGGGATAACC TTTTTCAGCG ATTACTATCT CTGGGCCGAT
GCCGCAACGA CAGCAGAGCT TTCAAAAAAC CAGAAACTCT TGTGGAACAG TCCGGTTTCT
TCTCATTTCT GGTATGGTTA CGACACGCTC GACTATCTCT TGAATCTGCT TTCAGTCAAA
CCCCTCAAAG GGAACAAGGC GCTTGTCAAA GCCCTGCAGC AATCGCCCCG CTTCAGGGCG
CACTATACGG ACTACGCTTT TGACGGCGGC AACGTCAATC GCTCCATGAA TGTGCTGCGT
TACGAAAACA ATATCATCAG ACAGGTTCGA TGA
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| Protein sequence | MTQRISFFCV LLASLAACPL PSCAAAETGK SSPASGTTQT QHAKQNPEFD IAKGKKLFAG
KNYPEAQKVF EGILINDSNP KSKSAHTARL WLAKALFMQQ KPKDASDQLD LLLKIALDPA
TIYEAHFDLA ACRLKLGQTL PAALDYLNVG ISAAPVGMER VRETALGNAR LLACTSLDAN
EITALERVAK SPDHQAFFFN ERMQKYLRSN NTGTFKSSLP LAASLIDSPS ISPLYRQLLE
SLKNQEKAVD NGTMKEQRIG VLLPLEFPVY SRSSVLPAGN RVFYGLYNRQ LMHQITKPEQ
LLNMMTVSTS GNEKNDASLA ATKLIEAHKP AIILGPIFSA ETVDASQAVK HAKIPLLTPT
ATDRLITENN PWCFQLNPTH EERGRIAARE LLKTSKPSVA AAIAEKTPYL EEMAKGYLDE
MKLAGTKTII FASLSGTDAD SSVFRQATGL HWGKNLGSLY LPMDNREVID KTIGLLISSK
TGYDRILGSG IWGEQDVFNR FRARLPKGIT FFSDYYLWAD AATTAELSKN QKLLWNSPVS
SHFWYGYDTL DYLLNLLSVK PLKGNKALVK ALQQSPRFRA HYTDYAFDGG NVNRSMNVLR
YENNIIRQVR
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