| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0548 |
|---|
| Symbol | |
|---|
| ID | 6354899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 619278 |
|---|
| End bp | 620309 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642668184 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001942619 |
|---|
| Protein GI | 189346090 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR00661] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC TTTTCGGGGT CCAGGGTACG GGAAACGGAC ATATCAGCCG CAGCCGGGAG
CTGGTAAGAA AGCTCAAGGA GAACGGCCAT GATGTTGCGG TGATTATCAG CGGAAGAAAA
GAAGAGGAAC TGAAGGAGAT CGGTATCTTC GAGCCGTATC GGGTTATGAA AGGACTTACG
CTGGTGACCT ACAAGGGCAG GATGAATTAC ATGGAAACCA TGTTTCAGCT CGATCTTGCA
CGTCTTATGA GTGATGTTCT GATGCTCGAT ACGTCGGGTA TAGACCTCAT TATTACCGAT
TTTGAACCGA TCACCTCGAT GGCGGCCCGG ATAAAGAATA TTCCCTGTAT GGGGTTCGGC
CACCAGTATG CGTTTCGTTA CAACATACCG TTTGCGCGCG GCAGCATTTT CGAAAAGTAC
ACGCTTCTGA ACTTCGCTCC GGCCAGATAT AACGCGGGAT TGCACTGGAG CCATTTCAAC
CAGCCGATCT TTCCTCCGGT TATTCCTGAA ATGCTGTATG TTTCACAAAA ACGTGAGGTT
GACAGCCGCA AGCTTCTCGT CTATCTTCCG TTTGAAGAGG TAGAGGATGT CGCTGCCTTT
GTAAGGCCTT TCGGAAATTA TCAGTTCTGC ATTTATGGCA AGGTGAAAGA AAATCTTGAC
GAAGGTCACC TGCATTTCAG GAGTTATTCG CGCGAGGGCT TTCTGAATGA TCTGACGGAG
TGTAACGGCG TGGTCTGCAA TGCAGGGTTC GAACTGCCGG GCGAAGCGCT GCATCTTGGC
AAGAAACTGC TTCTCCGCCC TCTTGACGGA CAGATCGAGC AGGAATCCAA CGCGCTTGCC
ATGGAGGAGC TGCAGTATGG CATGGCCATG CATTCGCTCG ACCCCGACCT TCTCGCCAGC
TGGCTTGAAC TGCCAGGGCG CGAGCCGCTG AACTACTCCC GTACGGTTGA TTTCATTGCC
GAATGGATCG GAAGCGGAGA CTGGGAGGGG CTTTCCCGAT ACACGGAAGC CGCTTGGAAG
GCAACATTCT GA
|
|---|
| Protein sequence | MKILFGVQGT GNGHISRSRE LVRKLKENGH DVAVIISGRK EEELKEIGIF EPYRVMKGLT
LVTYKGRMNY METMFQLDLA RLMSDVLMLD TSGIDLIITD FEPITSMAAR IKNIPCMGFG
HQYAFRYNIP FARGSIFEKY TLLNFAPARY NAGLHWSHFN QPIFPPVIPE MLYVSQKREV
DSRKLLVYLP FEEVEDVAAF VRPFGNYQFC IYGKVKENLD EGHLHFRSYS REGFLNDLTE
CNGVVCNAGF ELPGEALHLG KKLLLRPLDG QIEQESNALA MEELQYGMAM HSLDPDLLAS
WLELPGREPL NYSRTVDFIA EWIGSGDWEG LSRYTEAAWK ATF
|
|---|
| |