| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0501 |
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| Symbol | trpA |
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| ID | 6354848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 567835 |
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| End bp | 568638 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642668134 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001942573 |
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| Protein GI | 189346044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0623201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGA ATCGTATCGC TTCGCTTGTC GAGCAGGATA AAAAACTGCT TGTCGCTTAT
TATATGCCTG AATATCCGGT AGCGGGAGCA ACCCTTCCGG TGCTCGAAGC CCTCCAGGAA
AACGGTGCGG ATATTATCGA ACTCGGTATT CCTTTTTCCG ATCCCGTCGG TGATGGTCCG
GTTATACAGG AGGCTGCACA AAGAGCTATC AGGAACGGCG TAACCGTTAA AAATCTTCTC
GAAACGGTGC ACAACGCCCG ACGGGGTGCA GGGTGTAAGG CAATTACGGT TCCCATCATT
CTCATGGGGT ACTGCAATCC GCTGATCGCC TACGGAGGGG ACTGTTTTCT GAATGATGCC
GTCGAGGCGG GCGTTGACGG GCTTCTGCTT CCCGATCTCC CGCCTGAAGA GGCCGAAGAT
TTTCTTGAAA GGGCAAAAAG CTTCGGGTTG ACCGTGGTTT TTCTCATCTC GCCGGTTACT
CCGCCCGACC GGATCGAGAT GATCGATTCT CTTTCGACGG ATTTTTCCTA TTGTCTGGCA
GTCAATGCCA CAACCGGTAC CGCCAAACTT GCCGGAGAGG ATGCAGATGC CGCGATCGAG
GAGTATCTCA AACGGGTCAG GCAGCATACC CGGAAAAAAT TTGTCGTAGG TTTCGGTATC
AGGGACAAGG CCAGAGTCAT GCAGATGTGG AAGCTTGCAG ACGGAGCCGT TGTGGGGACA
GCACTTCTGC AGCGCCTTGC CGCGGCCCAT ACGCCTGGGG AAACTGCCCG TCTTGCCGGA
GAGTTCTGGC AGGCACTCCG ATAA
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| Protein sequence | MKQNRIASLV EQDKKLLVAY YMPEYPVAGA TLPVLEALQE NGADIIELGI PFSDPVGDGP
VIQEAAQRAI RNGVTVKNLL ETVHNARRGA GCKAITVPII LMGYCNPLIA YGGDCFLNDA
VEAGVDGLLL PDLPPEEAED FLERAKSFGL TVVFLISPVT PPDRIEMIDS LSTDFSYCLA
VNATTGTAKL AGEDADAAIE EYLKRVRQHT RKKFVVGFGI RDKARVMQMW KLADGAVVGT
ALLQRLAAAH TPGETARLAG EFWQALR
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