Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0492 |
Symbol | |
ID | 6354839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 556662 |
End bp | 559310 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642668125 |
Product | hypothetical protein |
Protein accession | YP_001942564 |
Protein GI | 189346035 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCCATA CCGGATTATT TCCGCTTGAC GAACTCTCGG GTGCGGAAAA TGTGGTACAT GGCAGTGGCG AAGAGAAAAA AAACTCATCG GCGCCCGATC TGCTGCCGTT GCCGGGAGAC GATACAAAGA GCGTTATAAC GTTCTCCGCC AAAGATTCGC TTCTGTATCA TTTCGACCGC AAGTCGATGG AGCTTATGGG AAAAGCCCGC ATCGACCGGG AGGCTACAAC GGTTACAGCT CCGAAAATAG TGGTCGATCT GGCTAACTCC ACCCTTGACG CCTTCGGTAC GGCAAATTCA TCGGGAACCC TGACCGAGCC GGCTGTTTTT TCAAATCGTG AGGGAAGTTT CAATGCCGAG AAAATAACCT ATACGTTTAC TTCCGGAAAA GGCGAAACGA CAAATATCGC ATCTCGTTCC TCCCAGGTTA TTTTCAGTGG AGAACAGGTA ACCCGTAAAG AGAATGGTGA GCTGATCGTC AGGGGAGGAA CGTTTACTAC CTGTGACGAT CCTGAGCCAC ATTACTGGGT TTCTTCCGAT TATATGCGGA TAATACCGGG CAGTCGGATC ATCGCCCGCC CGTTTGTCAT GTACATCCGG CCCGAGATTT TTTCGAAACG TCTGCCGGCC ATTCCCGTTC TGCCGCTTCC TTTCATGGTT TTTCCGTTAC ATGAAGGCCG GGCTTCAGGC GTGATCATTC CCCGTTTAAG TCATGACAGC GACAGAGGAT ATTATTTTTC CGATCTTGGC TATTTCTGGG CTGTCAATGA TTATGTCGAT ATGCGTATCG AGGGAGATAT TGCCTTCAAT GGCAGTTGGC GTCTCGGCGA GCGTTTCCGC TACAAAAGCG GGGACGCGTT CTCCGGCATT CTTGAAGGTG AATATGAGCG TTTTTTCAAG GGAGATGAAG ATGATTCCGA TTATGAGAAG TACAGCAGCT GGAATCTGAA GTTCGAGCAT CATCAGGAGT TCGATCCATC CTCAGCTCTT GATATGCGTA TGCAGTTTCA GGGAGGGGAC CGGAATTATG ACCTGAATAC CATCAATACG GAGACAATTG TCAACGAGCA GGCCGATTCG TATGCCTCTT TCGGCAAGAC GTCTGATGAT GAAAACAGTA TGTTCAGCGT TGGTTATCAG AGGTCAGACT ATCTGCAAAG CAGCGACGAA GGCCAGCTGT TGCGTACTGA ATTTTATCAG AATCGATACT ATCCGTTCCG TTCCGGGCGT CTTGGATCTC TTGGTGACTG GAGAGACAAT GTTTCCGTTA CTTCCGGGGC TTCGTTCCGC GCTCTTTTTT CTTCAGTTGA CGATATTGGT TCATACGATT ATCTTGCCGA TGCCAATGTG CAGGTCGGCT ATTACCACGA ATTATCAGGT TCGGATAAAA TTCTTTTTAC ACAGGGGGTT GCTTTACAGG GAAATCTGAT CGCAGACGAT GATTACTCCG ACAACCGGTA TGGTATGCGT TTAACGCTGC CATTCAGGAT GCAGTCCACA CTTTTCCGGC ATTTCAATGT CAACGCAGGG TTGTATTTCA ATCATTATTT CGTCGGCAAC GATCTCCTGA AGTCTTTTGA CAGCGATGGT ATTCGGGAGA CCCGACGGAA CGGTTCAGAG GGATTTTCAA CCTGGAATTT CAATGCCGAT GTTTCGACCC GCTTGTACGG CACTCTGCAA ACGCCTTTTC TTGAAGGCTT GACCGGCCTG AAAGCCATTC GTCATACGTT GATTCCCGTT ATTTCCTATA CCTGGAATCC TGATTTTACC GGTTCGGATT ATGATTATTA CGGAACGGTT TATGACGGAA GCGGCTATCT TCGGTATAAC CGGTTTGAGC ATTCGGTCTA TCACGATATC CCCGAAGGAC AGAGCAGCGT AGGCTTGACG CTCAAAAATA TATTTCATGG CAGGTTTGCC TCTTCGGGCG ATGCGCGAGG AGCTGAGCGA ACCGTCCAGC TGCTTTCGCT TTCAGCTTCA ACATCGTATA ATTTTGCTGC CGGCCAGATG CCCTGGGCTC CTTTGCTCAT TACAGCTTCA AGTACGGCCC TGTCTCCGAA TTTTCTGTTG AGTGCAGGTG CTCTCTATGA TTTTTACAGT TTCGATCGGC TGAGTGGCGA ACGTATTGAT CGTCTTCAGG CTGAAGATGG AAAAGGTTTA TTGCGTTTCC TGAGCGGTTA TTTCAATATG AGTTTCAATA TGCAGGGAAA GAACCGGAGC GGCAGTTCCG GAAGACCTGA AGCTCTTCGT GCCGAACAGG CGATTTTCCG GGAACGGTTC AGTGCGGATG ATTTCAGCTA TGTCGATTAT GATGTACCCT GGAAGCTCCG TCTTTCACTT TTTCTTCGGT CAGAGAGAAG TGACCCGCTT GAAGATGCGG AAACGACGGC TCTTCTCAAT GCATCAGCTA AAGTTGCCCT GTCGAAAAAC TGGCAGGTCG GAGTTAACAC AGGCTATGAC ATCGAACAGA ACAAGTTTGT TTTTCCTATG CTTCAGGTTT ATCGCGATCT TCATTGCTGG CAGATGGGCT TTCAGTGGGT ACCCTCAGGC GAGTTCAACA GCTACTCCTT TCAGATCGGT TTGAAAGCAT CACAGTTCGA TGATATTCGT TTTAAAACAG GAGGAAAAAC AAAGGGTTGG ACAGAGTAG
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Protein sequence | MVHTGLFPLD ELSGAENVVH GSGEEKKNSS APDLLPLPGD DTKSVITFSA KDSLLYHFDR KSMELMGKAR IDREATTVTA PKIVVDLANS TLDAFGTANS SGTLTEPAVF SNREGSFNAE KITYTFTSGK GETTNIASRS SQVIFSGEQV TRKENGELIV RGGTFTTCDD PEPHYWVSSD YMRIIPGSRI IARPFVMYIR PEIFSKRLPA IPVLPLPFMV FPLHEGRASG VIIPRLSHDS DRGYYFSDLG YFWAVNDYVD MRIEGDIAFN GSWRLGERFR YKSGDAFSGI LEGEYERFFK GDEDDSDYEK YSSWNLKFEH HQEFDPSSAL DMRMQFQGGD RNYDLNTINT ETIVNEQADS YASFGKTSDD ENSMFSVGYQ RSDYLQSSDE GQLLRTEFYQ NRYYPFRSGR LGSLGDWRDN VSVTSGASFR ALFSSVDDIG SYDYLADANV QVGYYHELSG SDKILFTQGV ALQGNLIADD DYSDNRYGMR LTLPFRMQST LFRHFNVNAG LYFNHYFVGN DLLKSFDSDG IRETRRNGSE GFSTWNFNAD VSTRLYGTLQ TPFLEGLTGL KAIRHTLIPV ISYTWNPDFT GSDYDYYGTV YDGSGYLRYN RFEHSVYHDI PEGQSSVGLT LKNIFHGRFA SSGDARGAER TVQLLSLSAS TSYNFAAGQM PWAPLLITAS STALSPNFLL SAGALYDFYS FDRLSGERID RLQAEDGKGL LRFLSGYFNM SFNMQGKNRS GSSGRPEALR AEQAIFRERF SADDFSYVDY DVPWKLRLSL FLRSERSDPL EDAETTALLN ASAKVALSKN WQVGVNTGYD IEQNKFVFPM LQVYRDLHCW QMGFQWVPSG EFNSYSFQIG LKASQFDDIR FKTGGKTKGW TE
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