Gene Clim_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0492 
Symbol 
ID6354839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp556662 
End bp559310 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content48% 
IMG OID642668125 
Producthypothetical protein 
Protein accessionYP_001942564 
Protein GI189346035 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCATA CCGGATTATT TCCGCTTGAC GAACTCTCGG GTGCGGAAAA TGTGGTACAT 
GGCAGTGGCG AAGAGAAAAA AAACTCATCG GCGCCCGATC TGCTGCCGTT GCCGGGAGAC
GATACAAAGA GCGTTATAAC GTTCTCCGCC AAAGATTCGC TTCTGTATCA TTTCGACCGC
AAGTCGATGG AGCTTATGGG AAAAGCCCGC ATCGACCGGG AGGCTACAAC GGTTACAGCT
CCGAAAATAG TGGTCGATCT GGCTAACTCC ACCCTTGACG CCTTCGGTAC GGCAAATTCA
TCGGGAACCC TGACCGAGCC GGCTGTTTTT TCAAATCGTG AGGGAAGTTT CAATGCCGAG
AAAATAACCT ATACGTTTAC TTCCGGAAAA GGCGAAACGA CAAATATCGC ATCTCGTTCC
TCCCAGGTTA TTTTCAGTGG AGAACAGGTA ACCCGTAAAG AGAATGGTGA GCTGATCGTC
AGGGGAGGAA CGTTTACTAC CTGTGACGAT CCTGAGCCAC ATTACTGGGT TTCTTCCGAT
TATATGCGGA TAATACCGGG CAGTCGGATC ATCGCCCGCC CGTTTGTCAT GTACATCCGG
CCCGAGATTT TTTCGAAACG TCTGCCGGCC ATTCCCGTTC TGCCGCTTCC TTTCATGGTT
TTTCCGTTAC ATGAAGGCCG GGCTTCAGGC GTGATCATTC CCCGTTTAAG TCATGACAGC
GACAGAGGAT ATTATTTTTC CGATCTTGGC TATTTCTGGG CTGTCAATGA TTATGTCGAT
ATGCGTATCG AGGGAGATAT TGCCTTCAAT GGCAGTTGGC GTCTCGGCGA GCGTTTCCGC
TACAAAAGCG GGGACGCGTT CTCCGGCATT CTTGAAGGTG AATATGAGCG TTTTTTCAAG
GGAGATGAAG ATGATTCCGA TTATGAGAAG TACAGCAGCT GGAATCTGAA GTTCGAGCAT
CATCAGGAGT TCGATCCATC CTCAGCTCTT GATATGCGTA TGCAGTTTCA GGGAGGGGAC
CGGAATTATG ACCTGAATAC CATCAATACG GAGACAATTG TCAACGAGCA GGCCGATTCG
TATGCCTCTT TCGGCAAGAC GTCTGATGAT GAAAACAGTA TGTTCAGCGT TGGTTATCAG
AGGTCAGACT ATCTGCAAAG CAGCGACGAA GGCCAGCTGT TGCGTACTGA ATTTTATCAG
AATCGATACT ATCCGTTCCG TTCCGGGCGT CTTGGATCTC TTGGTGACTG GAGAGACAAT
GTTTCCGTTA CTTCCGGGGC TTCGTTCCGC GCTCTTTTTT CTTCAGTTGA CGATATTGGT
TCATACGATT ATCTTGCCGA TGCCAATGTG CAGGTCGGCT ATTACCACGA ATTATCAGGT
TCGGATAAAA TTCTTTTTAC ACAGGGGGTT GCTTTACAGG GAAATCTGAT CGCAGACGAT
GATTACTCCG ACAACCGGTA TGGTATGCGT TTAACGCTGC CATTCAGGAT GCAGTCCACA
CTTTTCCGGC ATTTCAATGT CAACGCAGGG TTGTATTTCA ATCATTATTT CGTCGGCAAC
GATCTCCTGA AGTCTTTTGA CAGCGATGGT ATTCGGGAGA CCCGACGGAA CGGTTCAGAG
GGATTTTCAA CCTGGAATTT CAATGCCGAT GTTTCGACCC GCTTGTACGG CACTCTGCAA
ACGCCTTTTC TTGAAGGCTT GACCGGCCTG AAAGCCATTC GTCATACGTT GATTCCCGTT
ATTTCCTATA CCTGGAATCC TGATTTTACC GGTTCGGATT ATGATTATTA CGGAACGGTT
TATGACGGAA GCGGCTATCT TCGGTATAAC CGGTTTGAGC ATTCGGTCTA TCACGATATC
CCCGAAGGAC AGAGCAGCGT AGGCTTGACG CTCAAAAATA TATTTCATGG CAGGTTTGCC
TCTTCGGGCG ATGCGCGAGG AGCTGAGCGA ACCGTCCAGC TGCTTTCGCT TTCAGCTTCA
ACATCGTATA ATTTTGCTGC CGGCCAGATG CCCTGGGCTC CTTTGCTCAT TACAGCTTCA
AGTACGGCCC TGTCTCCGAA TTTTCTGTTG AGTGCAGGTG CTCTCTATGA TTTTTACAGT
TTCGATCGGC TGAGTGGCGA ACGTATTGAT CGTCTTCAGG CTGAAGATGG AAAAGGTTTA
TTGCGTTTCC TGAGCGGTTA TTTCAATATG AGTTTCAATA TGCAGGGAAA GAACCGGAGC
GGCAGTTCCG GAAGACCTGA AGCTCTTCGT GCCGAACAGG CGATTTTCCG GGAACGGTTC
AGTGCGGATG ATTTCAGCTA TGTCGATTAT GATGTACCCT GGAAGCTCCG TCTTTCACTT
TTTCTTCGGT CAGAGAGAAG TGACCCGCTT GAAGATGCGG AAACGACGGC TCTTCTCAAT
GCATCAGCTA AAGTTGCCCT GTCGAAAAAC TGGCAGGTCG GAGTTAACAC AGGCTATGAC
ATCGAACAGA ACAAGTTTGT TTTTCCTATG CTTCAGGTTT ATCGCGATCT TCATTGCTGG
CAGATGGGCT TTCAGTGGGT ACCCTCAGGC GAGTTCAACA GCTACTCCTT TCAGATCGGT
TTGAAAGCAT CACAGTTCGA TGATATTCGT TTTAAAACAG GAGGAAAAAC AAAGGGTTGG
ACAGAGTAG
 
Protein sequence
MVHTGLFPLD ELSGAENVVH GSGEEKKNSS APDLLPLPGD DTKSVITFSA KDSLLYHFDR 
KSMELMGKAR IDREATTVTA PKIVVDLANS TLDAFGTANS SGTLTEPAVF SNREGSFNAE
KITYTFTSGK GETTNIASRS SQVIFSGEQV TRKENGELIV RGGTFTTCDD PEPHYWVSSD
YMRIIPGSRI IARPFVMYIR PEIFSKRLPA IPVLPLPFMV FPLHEGRASG VIIPRLSHDS
DRGYYFSDLG YFWAVNDYVD MRIEGDIAFN GSWRLGERFR YKSGDAFSGI LEGEYERFFK
GDEDDSDYEK YSSWNLKFEH HQEFDPSSAL DMRMQFQGGD RNYDLNTINT ETIVNEQADS
YASFGKTSDD ENSMFSVGYQ RSDYLQSSDE GQLLRTEFYQ NRYYPFRSGR LGSLGDWRDN
VSVTSGASFR ALFSSVDDIG SYDYLADANV QVGYYHELSG SDKILFTQGV ALQGNLIADD
DYSDNRYGMR LTLPFRMQST LFRHFNVNAG LYFNHYFVGN DLLKSFDSDG IRETRRNGSE
GFSTWNFNAD VSTRLYGTLQ TPFLEGLTGL KAIRHTLIPV ISYTWNPDFT GSDYDYYGTV
YDGSGYLRYN RFEHSVYHDI PEGQSSVGLT LKNIFHGRFA SSGDARGAER TVQLLSLSAS
TSYNFAAGQM PWAPLLITAS STALSPNFLL SAGALYDFYS FDRLSGERID RLQAEDGKGL
LRFLSGYFNM SFNMQGKNRS GSSGRPEALR AEQAIFRERF SADDFSYVDY DVPWKLRLSL
FLRSERSDPL EDAETTALLN ASAKVALSKN WQVGVNTGYD IEQNKFVFPM LQVYRDLHCW
QMGFQWVPSG EFNSYSFQIG LKASQFDDIR FKTGGKTKGW TE