Gene Clim_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0469 
Symbol 
ID6354464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp531315 
End bp531980 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content55% 
IMG OID642668100 
ProductRibulose-phosphate 3-epimerase 
Protein accessionYP_001942541 
Protein GI189346012 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGGAA CATCAACCCT TCTTGCTCCG TCCATCCTGT CGGCGGATTT CACCGAACTG 
CGATCATCGA TAGCCCTTGC GGATAAAGCC GGCGCCGACT GGATGCACTG TGACGTCATG 
GATGGTGTCT TCGTGCCCAA TATCTCCTTC GGACCGTTCA TCGTACAGGC CGTTGCCGCA 
TGCACGGATA CAATCATCGA TACCCATCTG ATGATTACCG ATCCCGACCG GTTCATTGCC 
GATTTCATAA AAGCCGGATC ACACCAGATT ACCGTTCATC AGGAAGCATG CCCGCACCTG 
CACAGAACCA TACAGTACAT TAAAAGCCTT GGCGCCAAAG CAGGGGTCTC GATCAACCCC 
GCAACGCCGG TCTCGGTGCT CGAATCCATT CTTCCCGATC TGGACCTCGT GCTTCTGATG 
TCCGTCAACC CAGGGTTCGG CGGCCAGAAG TTCATACCCT CGTCACTTGA AAAAATCGCA 
AAGCTCAACG TCATGCGACA GGAGATGAAC CCTCAGATGG TGATAGCCGT CGATGGCGGC 
GTAACTGAAG AAAACGCTGA ATCGGTGGTA AAGGCGGGTG CCGATTCCCT CATTGCGGGA 
ACGGCGTTCT TCAAGGCTGC CGACCCGGTC GCGACAGCCG CAAAAATCAA GGCTTTTGCC 
AGGTAA
 
Protein sequence
MPGTSTLLAP SILSADFTEL RSSIALADKA GADWMHCDVM DGVFVPNISF GPFIVQAVAA 
CTDTIIDTHL MITDPDRFIA DFIKAGSHQI TVHQEACPHL HRTIQYIKSL GAKAGVSINP 
ATPVSVLESI LPDLDLVLLM SVNPGFGGQK FIPSSLEKIA KLNVMRQEMN PQMVIAVDGG 
VTEENAESVV KAGADSLIAG TAFFKAADPV ATAAKIKAFA R