Gene Clim_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0390 
Symbol 
ID6354385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp429504 
End bp430706 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content44% 
IMG OID642668021 
Producthypothetical protein 
Protein accessionYP_001942462 
Protein GI189345933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000281987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT GCCCGGCATC ACATCTCCCG CTAAGGGAAG AACCTGAATG GAGGGCAATC 
CACAACGACG GTGGATATGA AACCATTTTC AGACTTATCG GCAGCGATGT CATTCAATGT
GAACATCGAT CCGATAACGG AAACATTGTT CTCTCCGGCA TCGATTCAAA AAAATTCCTC
TCCATTCTTG AAAATCTGAA CCTGCTTCAT ACGCCGATTT ATCTGCTCGT CAATTTAGAA
AACGTAACCG ACATCGGATA CCAATACAGA ACCGATTTCC TGAATTTTGC CTTTAACTGG
GGAAAAAACA TAACGATGCT TGTTTTGTAC AATGTACGCG ACGAGATTCG AAACCGCCTT
GAATGTTTCA GCGCAATAGC ACCTGAAAAA ATTCATATGA CGTTCGCGAA CAGCTATAAA
GACGCACTTG ACATCATCCT GAAGCTGCCC GAACACTCCT CTTCCGAAAC AGGGGAACTC
CCTGAAAAAA ACGGATCGGA ACAGTTGAAA ACCAAACTGC TCGCCTCCAT CACAAGAATT
TCACTGCTCA ATCTGCTTGA TCAACCCGTT CAAACCTCAC CTGCAGAACA TGAGTTTTAT
GACTATTTTA TGGCCGTAGA GGAATTCCGA AAAGACATGA TAAGCAAGCG AAAGCACGAT
CGTGAACAAA AAAAAGAAAT CCGACAGGAA TATGAGCGGC GTTATAATAA GCAGCTTTCC
GACCTGCAGC AGGAAATTGA CCTGCACAAA AAACAGGTAC AAAGTTACAA AAACACAGTG
ACGGCACTCC ACTCCGGCAT AGCATTACGT GATGAACAAC TGTTGCGACT TAATGCCGTC
CATGCCGAAA AAAAAACGAT AACCGAACTG CTATGCAAGC AACTGCATTC CATTGACAAA
AACGACCATT TTGGAAACTT GTGCCCGGAT ATGGGAGATA CAAAGCCGGT CACTGAACAC
TACGATCTGA AACTGACTGC CAGCGAGGCC CTTTTCCTCG ACCAACTGAA AAAAAATCAC
CCCTTCCTGA CCGGCGACGA TGTAAAAATC TGTCTGCTGA TCAGAAAAAA CTACAGCACC
AAAATGATTG CCCGCCTCAG TGCCACATCA ACCAGAGGCA TAGAAAGCAT CCGCTACAGG
TTGCATAAAA AACTCGGGCT GCAAAAAAAT CAATCAATTA AAGCGTATCT CTGCGGTTTT
TAA
 
Protein sequence
MKRCPASHLP LREEPEWRAI HNDGGYETIF RLIGSDVIQC EHRSDNGNIV LSGIDSKKFL 
SILENLNLLH TPIYLLVNLE NVTDIGYQYR TDFLNFAFNW GKNITMLVLY NVRDEIRNRL
ECFSAIAPEK IHMTFANSYK DALDIILKLP EHSSSETGEL PEKNGSEQLK TKLLASITRI
SLLNLLDQPV QTSPAEHEFY DYFMAVEEFR KDMISKRKHD REQKKEIRQE YERRYNKQLS
DLQQEIDLHK KQVQSYKNTV TALHSGIALR DEQLLRLNAV HAEKKTITEL LCKQLHSIDK
NDHFGNLCPD MGDTKPVTEH YDLKLTASEA LFLDQLKKNH PFLTGDDVKI CLLIRKNYST
KMIARLSATS TRGIESIRYR LHKKLGLQKN QSIKAYLCGF