| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0342 |
|---|
| Symbol | |
|---|
| ID | 6354336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 378204 |
|---|
| End bp | 379346 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642667972 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001942414 |
|---|
| Protein GI | 189345885 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.509929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGGA CGCTTTTTGT TTTAGCCGGA GAAGTTTCCG GCGACATGCA CGCGGCAGGA
GTTGTTGCTG AGCTTCTGAG ACGGAAGCCC GATGTAAGGG TATTCGGTAT AGGGGGAGAG
AGGCTGCGGG CGCTTGGCGC CGAGCTTTCA TTCGACACTC GCCAGATGAG CATTATGGGA
TTTGTCGATG TGCTTCGGCA TGCCGGTTTT CTCCGGAAGG TAATCAGTGA ACTGAAAAGA
CTTGTGCGGG CGGAAAAACC CGATGCGGCC CTGCTCGTTG ATTATCCCGG TATGAACCTG
ATTATGGCGC GTTTTCTGCA TGACCTTGGT ATTCCCGTCA TATTTTATAT CTCTCCGCAG
GTGTGGGCAT GGAAAGAGGG AAGGGTCGGA AAGATACGGA AAACGGTGGA CAGACTGCTG
GTGATTTTCG ATTTTGAAGT TGATTTCTAT CGTCGTCGGG GAGTGAATGC CGAGTTTGTC
GGAAATCCGG TTATCGAAGA GCTTCGGGAC GAGGAGCTTC CGCCAGCCGA TGTCTTTTTG
AGAAAACATC ATATTGAACA GGGAGCAATA CTGATTGGCC TTCTTCCCGG AAGCAGACGG
CAGGAAATTT CAAAGATACT GCCCGAGATG ATCAGGGCTG CGGGGATGCT CGGCGAACAG
TACAATGCCG TATTTCTTCT TGGGCGCGCA CCGCACCTCG ATTTCCGCTG GCAGGATCAT
GTGGCGGAAG ACAGGGATAT CCGGGTTGTG GAGTGCCGCA GCTACGAAGT AATGAAATAC
AGCAACCTTG CCTTCGTGAC TTCGGGAACC GCTACACTCG AAGCGCTCTG TTTCGGGCTT
CCGATGATTG TGGTTTACCG AACGGGTTGG ATGAATTATC AGATCGGAAA ACGTCTTGTC
AAGCTGAAGA GTATTTCCCT CGCCAATATC GTTGCCAGAG GGCTTGGCGC TGCAGGACAG
GCTGTTCCGG AGCTGATTCA GCATGACGCC TGTGCCGAAG GGATGGTGAA AGCGGCGATG
CAGCTGCTTG ACAATCCGGC TCTTGCTGCC GATATGCGCG CGGAATTGCT TGGCGCAAGG
GATAAACTGG CCAGTGCTTC CCCATCGAGG GCCGTTACAG CAATTATAGA AGAATATTTA
TAA
|
|---|
| Protein sequence | MSRTLFVLAG EVSGDMHAAG VVAELLRRKP DVRVFGIGGE RLRALGAELS FDTRQMSIMG
FVDVLRHAGF LRKVISELKR LVRAEKPDAA LLVDYPGMNL IMARFLHDLG IPVIFYISPQ
VWAWKEGRVG KIRKTVDRLL VIFDFEVDFY RRRGVNAEFV GNPVIEELRD EELPPADVFL
RKHHIEQGAI LIGLLPGSRR QEISKILPEM IRAAGMLGEQ YNAVFLLGRA PHLDFRWQDH
VAEDRDIRVV ECRSYEVMKY SNLAFVTSGT ATLEALCFGL PMIVVYRTGW MNYQIGKRLV
KLKSISLANI VARGLGAAGQ AVPELIQHDA CAEGMVKAAM QLLDNPALAA DMRAELLGAR
DKLASASPSR AVTAIIEEYL
|
|---|
| |