| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0312 |
|---|
| Symbol | |
|---|
| ID | 6353829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 345482 |
|---|
| End bp | 346039 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642667941 |
|---|
| Product | outer membrane chaperone Skp (OmpH) |
|---|
| Protein accession | YP_001942385 |
|---|
| Protein GI | 189345856 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2825] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.955196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA TGCATTGTGC AGGACGGGTG ACGAGCTTTT CCCGCCAGAT TATTATGGCC
ATGATCCTGA GCGTCCTCCT TGCCTCACCG GCAGCTTTTG CAGCTCAGAA CGCGGAAAGA
ACAGGTGTCG TGGATTTCGG AAAAATCATG CAGCAGATGC CCGAAACCAA ACAGGCTGAA
ACAACACTTC AGGCAACAGC TGCCCCGCTG CAGAAAGAGT TCGAACGTTT GAAACTGGAT
TTCGAGAAAG CTGTCGCGGC ATACAAGCAA CAGGCCGCAA CAATGACAAA AGCAGCAAGG
GATCAGAAGG AAAAAGAGCT GAACGTCAAA GGACAGGCAG TACAGAAATA CCAGCAGGAT
AAATTCGGAC GCGGTGGAGT TGTCGACAAA AAAGAACAGG AACTGATTGC CCCGATCCGT
CAGAAAGCAC TCGGAGCCGT ACAGACCATA GCACAGAAGG AAGGGTTCAC GCTGGTGATC
GATAAATCGG TTCTGGTTTA CGGAGCCGCT GAGCAGGACC TTACCTTCAA GGTGATGAAC
CAGTTGAATA TCAAGTAA
|
|---|
| Protein sequence | MKMMHCAGRV TSFSRQIIMA MILSVLLASP AAFAAQNAER TGVVDFGKIM QQMPETKQAE
TTLQATAAPL QKEFERLKLD FEKAVAAYKQ QAATMTKAAR DQKEKELNVK GQAVQKYQQD
KFGRGGVVDK KEQELIAPIR QKALGAVQTI AQKEGFTLVI DKSVLVYGAA EQDLTFKVMN
QLNIK
|
|---|
| |