| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0302 |
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| Symbol | |
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| ID | 6353819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 339300 |
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| End bp | 340031 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642667931 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001942375 |
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| Protein GI | 189345846 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000137862 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGAAC CGATTAATGA ACAGTGCAGT CCGGAAGAGG GCGCTTTTCT GCTGGTGGAT
AAACCGCTGG ACTGGACCTC GTTTGACGTT GTCGCTAAAA TCAGGAATAC CTATCGAAAA
AGCGGCCTGA AGTGCAAGGT TGGCCATTGT GGCACCCTTG ATCCAAAGGC AACAGGCCTT
CTGATTCTCG CCACCGGTCG GAAGACCCGT CAAATATCAG GTCTTGAGGT GCTCGATAAG
GTTTATGAGG GAACAATACG GCTTGGAGCG GTCACCGACA GTCATGACAC CGAAACCGAG
GAGTATGGCC ATTGCGATAC CGGGCATCTG ACGCTATCGA AAATACGGGA AACCGCAGCT
TCCTTTATAG GCTCATCTCT TCAGCAGCCG CCCATGCATT CGGCTGTCTG GCACAACGGG
AAACGTCTCT ATGAATTTGC CCGAAAGGGA GAGGTTGTCA GGGATCGCAA GGTCCGGGAA
ATTGTCATAC ACCGGTTTGA GATTACGGCA GTCACTCTTC CCATGGTTTC GTTTGAACTT
GAAGTTTCAA AAGGTGCCTA TATCAGGGTG ATTGCCCATG AGTTCGGCAA TGCACTCGGA
GTTGGCGGCT ATCTGGCCTC CCTCCGAAGA ACGGCTATCG GTTCCTATCA CATCGCCGCA
TCACGAAGCG TATCCGAGAC GGTCGACGTT ATCGCCTCCG GTTGTTCCGC GGTTTCCGGT
CAAAGGAGTT AA
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| Protein sequence | MQEPINEQCS PEEGAFLLVD KPLDWTSFDV VAKIRNTYRK SGLKCKVGHC GTLDPKATGL
LILATGRKTR QISGLEVLDK VYEGTIRLGA VTDSHDTETE EYGHCDTGHL TLSKIRETAA
SFIGSSLQQP PMHSAVWHNG KRLYEFARKG EVVRDRKVRE IVIHRFEITA VTLPMVSFEL
EVSKGAYIRV IAHEFGNALG VGGYLASLRR TAIGSYHIAA SRSVSETVDV IASGCSAVSG
QRS
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