Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0267 |
Symbol | |
ID | 6353784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 301753 |
End bp | 306318 |
Gene Length | 4566 bp |
Protein Length | 1521 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642667897 |
Product | hypothetical protein |
Protein accession | YP_001942341 |
Protein GI | 189345812 |
COG category | [S] Function unknown |
COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAAGA CTAAACGATA TATACTTGCA CTCCTGACAG GAATCTCGGC TGTCGTGCTG GTGCTCTCTG CGATTGCAGC TGTCGTGCTG AACAGCGGCA TGCTTGACCG ATATGCAAAA GAACGGATAA CAACGCTTTT TAACGATGAA TATCTCGGAC GGCTTGAACT GCGGGAGGTT CAACTGCATT TTCCGAACAG GGTGACCCTT CTCAAGCCGG AAATTTACGA ACCGGGCTCC AGAGTCCCCG CACTTGCTGC CGAAAAAATC CGTCTGCGTT TTAATTTCCT CATGCTGCTC CAGCCGGAAA TAACCCGGCT TTCATTCAGA AAAATAAGTG CCGACAGTCT GAACGCCTCC GTGATTGAAA GGGCAGACGG AAAGAAAAAC CTCGACGTGA TCTTTACCTC CCGCAAGCCC GACTCGACGA AAACGCCTTT TGAAAGCTTT TTCTGTAAAA AGCTCAACAT CACGAACGGC AGCGCCTCAT GGACACAAGA GTCTCCGGGA AAAACGCCGC TGCGCTACAA CGCAAAAAAG ATAACGCTCA AGCTCACCGG ATTCAGAGTC AAGGAGCAAC TGCTCAGCGG CGTTCTTGAA AAAGCTGAGT TTTCGTTACC GGATAACCGT TTCAGCCTGC ATGAGGGGTC GGGCAAATTC CATTTTTCCA CCAGCCGAAG TGAACTGCTT GCATTCAAGG CAAGAAGCGG AAAAAGCAAT GCGGAATTAT CTATATCACT GAATGATTTC AATATTTTCA AGTCCGATTC GATCGGCCTC CTGCTCGAAC GTCTTGTCGC AAGCCGTTCG TTCATCAATA TCGCAAACCT GAACCTGCAT ACCGATGAGC TTAAAGTTTT CTTTCCGACA CTGAAACTTC CGGAAGGATT CTATACGATC AAAGGTAATG CGAAAGCAGC TGACGGAACC CTCAGTCTGC TCGATTCGAA ACTTTCGCGC GGCAAAAGCA GGCTTGCGCT CAGCGGAGAA ATACAGAATC TGCAGAAAAA GAACGATCTC TCGTTCAATG CCGTCTGCGA CAGTTCAAGA ATCGAACCCG AGTTTTTAAA GGCCATACTC ACTGAAGAAA CGCATGAAGA GTTTGCCGAA AGGCTCGGAA CCATCGAGTT TCTCGGTAAA GCAAAGGGGA CACTGAAAAA AGCCGACACC GATTTCACCC TGATAACAGG TATCGGCAAG GCATCACTTA AAGCCGAAGC TGCCGGCGAC CCTGAAAAAC AAATCGCATG GAAAGGGACG TTTGCAATCG ATGACCTCGA ACCATACCGT CTCTTCGAAG CATCCGAAAA AGACATCAGA AAAAGCCTGG TCACGGCTTC CGGAAACATT GACGGTGTCA GCGACGGGTT CAAAAGCATC GAATCGCTCT CCCTTTCAGC CCGTCTGAAC GACTCGTTCT GGCAACTGCA GGAAATCAAA GAAGGCACCG TTTCCCTCGA TTACAAGCGC CGCCTGCTGA AATTGACCGC TCTCCTCATG AACAATGGAG AACAGCTCGA TGCTTCCGGC GATATCGACT TCAGCAGCGA AGTCCCCCGG TACCGAGCGG ATGGCAGCAT GAAAAAACTC AATCTGGCAA AAGCATTCGC TTCACGCGAT TTTATAACCG ACCTCAACGG CACCTTTGCT CTCAAAGGCG AAGGATTCGA TGCCCGCACT CTGAATGCCG CTCTGGCAGC CCGCTTCAAA CCATCAACGA TCAATCAGTT CAGGTTCAAG GACAATGCTG AAATAACCGC TGCCATTGCC CAGCGTGAAC ACTCGTCACT GGCTTCCCTG AAAAGTGATT TTCTCGACAT TTCTCTCAGC GGCGACTATG CGCTCAAACA GCTCATCGCG GTTTTACAGA TGACCGGAAA CAGCTTCGCA AGGGAGATCC GAACCCAGAG CCTCTGGAAC ACGGGCCTGA CTTCGGGCCC CGTCCCTGAA GGATTAAGCG CCACTCAGCC GGTAAGAATA TCTTATATGG CAGATGTGAA GGATGTCGCT CCCCTTGCGG TGCTCCTGCC GGTAAAAGAT ATAACGCTAC AGGGACGATC GGCAGGAGAG TTGCTGTACA GGAATGGCAT GTGCACCCTG AACTCTTCGT TCGATATCCA CTCATTCACC GGCAGCAACG GAAGTGCGCT CGGCAATGTG ACGGCAACTG CAACTGCCGA ATGCAGCAGT ACAGGCGTAT CAAAAGCCGT GCTCAAAGGC AAGGCGGCAA CACTGAGTGC CGCAGGCGTA AAATCCCGGA ATCTTGTTTT CGATGCGGCA TATATTCCCG CACAGCTCAC CACCTCACTG GACGGCGAAC TGCCTGAACA GGGATGGACT CTTGCCGCTT CATTCTCGGC AAAACGCAAC GGCAGCAGCT ATAACATCTC CCTGAACCGC TTTTCGGCCG GAAATGGCGG AAGCCGCTGG CAGTCGGTAT CAACATCTCC TGTAGTAATT ACCAGTTCAT CGGCACTGTT CAGCCGGTTT GCGATTGCCA AAGGAAAGCA GCAGGTCGTT CTCGACGGAG AGTTGAGCAG CAGCAAAGCA GGAACCTTCC AGTGTACGCT CTCCAATATC GATCTGGCAG GATTCAACGG CAAAACGGCA TCCGGTTCAT CGGCAAAACT TTCGGGATCA ATGAACGGTA CGCTTGTTGT AAGCGGTTCT CCTGGCACAA AAACCAGTAC CCTCAATCTT TCCGGCAAAA GAGTCCGTTA TGACTCCATG GTGATAGGCA GCATGCAGTG CAATGCGCGT CACAGCGGAA CCAGGCTCAC GTTTGATTTC CGCAGTGCAA TCCCCCCTGC TTCCGACGAA GCCTCAGGCC ATACTCCGCT CCTCTCGGTA AACACCATTG AAGGCAGCGG AACTGTCCCG TTGCATCTGG TCTACTTCCC GCTGCACGTC AGAATTCCCG AGCAGCAATC CATAAACGCA TCGTTCAGAT CGGACAACCT CTCCGCGCAG TTTCTCGAAT ATGTTCTGCC TTTTTTTGAA AATGCCGAGG GTATCATTCC TACAACCCTC ACCATAGGAG GAAAAACCCC GAAACCTGAT ATTTACCTTA CATCAAGCCT GAAGGGAACA AAAGTCACCG TTGAACCGAC TCAGGTAAGC TACCTGCTCG ATGGCGATGT AGAGGTCAAT CCAAGGCAGA TCGAGCTGAA AAACATCAGA ATAAGGGATA TGCGAAACGG AACCGGACGG ATAAACGGGA TAATCCGGCT GGTAAAGCTT GAACCGAAAA CACTCGCTCT CGAAGCAAGC TGCTCGAAAC TGCTGCTGTT CGATAAGAAG GACAGTAAAG ATGAGACATC TTTCGGCACC ATTACGGGCT CGAGCCGAAA TATGTCTCTG CAGGGCGAAC TATCCTCGCC GGTTGTCGAG GGCGGCATGT TTATTGATAA TGCTGATTTT TCACTTTACC GAGCAGGAGC GAATGAGAGC TCCAAGTATA TCGGGGTGGA GAAGTTCATC GAATTTGTTC CCCGTTATCC CGCCAAAAGC AGCGATGATT CGCATCAGGA GGGTTCGGAC AGACCTGCCG AATTCTACTA CTCGCTGCTC GATATTCTGC AAATCAGGGA ACTGAAGCTC AGCGGAGCCG AACCGTTGAA ATATACGGTC ATTTTTGACC GCATCAGGGG AGAGCAGCTT GAAACATCAA TCAGCAACCT CTCTCTTATC GTCAATAAAA GCAATCAAAA CTACCGGCTG TATGGCTCCG TAAACATTAC CGGCGGAAAG TACCGTTTTT CCAACACGAA TTTCGATCTG GAGGATGGCG GCAAAATCAC CTGGAACAAT GCTGAAATCC GTGATGGTGC AATGGACAAC CTCTACGGAA GCAAGTATAT CAGCGCCACC AATACCCAGA CAGGCGAACG CGACAATGTC CGCCTGCTGC TTGCCATAAC AGGCACCCTG AATGAACCGC GAGTTGCCAT GGGTTACTAT CTGAACGAGC AGATGCAGCC TTACGCATCC CAAAGCATGC TCGGAGGAAA ACCAAGCCAG ATAGACCCCA ATGCCGAGCT CAACGTTATT TCCATGCTGC TCTCGAAACA GTGGTATGCG GCTCCTGGCA GCAGTGGTCA GTATGGAAAC ATTGCCGTAT CGAGCGCAGG GCTTTCAGCT GGCGCCGGAC TGATCTCTTC GCAGATTTCG CGTATTGTAC AGAATATCGC CGGTATCGAA AGTTTCAATG TCAATGTAGG CGTGGACAAT AAAGGGGCTC TCAGCGGGCT TGATCTTTCA TTCGCACTCA GCGTACCCGG AACCAATGGA AAAGTTCGCT TTGTAGGAAC AGGAAGCAGT CCGGATATCA AGGACAAGGC ACTGTTCAAC TATTACGGAA CATCCCAGAA AATCGAGTAC CGCGTCACGC CCAAAGTTTA CGTGGAAGCT TACCGCTCTT ACGGCCAGAA CAGCAGCACG GCGTCGAATA CCAACCTGCA GAAGCCTTCA GAAACCTGGG GAGCCAGCGT TTCCTACCGG GAACGGTTCC ACTCCTGGGA TCAATTCTGG AAACGTGTTA AACCCTCATC GGCCGAGAAG AAATAA
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Protein sequence | MEKTKRYILA LLTGISAVVL VLSAIAAVVL NSGMLDRYAK ERITTLFNDE YLGRLELREV QLHFPNRVTL LKPEIYEPGS RVPALAAEKI RLRFNFLMLL QPEITRLSFR KISADSLNAS VIERADGKKN LDVIFTSRKP DSTKTPFESF FCKKLNITNG SASWTQESPG KTPLRYNAKK ITLKLTGFRV KEQLLSGVLE KAEFSLPDNR FSLHEGSGKF HFSTSRSELL AFKARSGKSN AELSISLNDF NIFKSDSIGL LLERLVASRS FINIANLNLH TDELKVFFPT LKLPEGFYTI KGNAKAADGT LSLLDSKLSR GKSRLALSGE IQNLQKKNDL SFNAVCDSSR IEPEFLKAIL TEETHEEFAE RLGTIEFLGK AKGTLKKADT DFTLITGIGK ASLKAEAAGD PEKQIAWKGT FAIDDLEPYR LFEASEKDIR KSLVTASGNI DGVSDGFKSI ESLSLSARLN DSFWQLQEIK EGTVSLDYKR RLLKLTALLM NNGEQLDASG DIDFSSEVPR YRADGSMKKL NLAKAFASRD FITDLNGTFA LKGEGFDART LNAALAARFK PSTINQFRFK DNAEITAAIA QREHSSLASL KSDFLDISLS GDYALKQLIA VLQMTGNSFA REIRTQSLWN TGLTSGPVPE GLSATQPVRI SYMADVKDVA PLAVLLPVKD ITLQGRSAGE LLYRNGMCTL NSSFDIHSFT GSNGSALGNV TATATAECSS TGVSKAVLKG KAATLSAAGV KSRNLVFDAA YIPAQLTTSL DGELPEQGWT LAASFSAKRN GSSYNISLNR FSAGNGGSRW QSVSTSPVVI TSSSALFSRF AIAKGKQQVV LDGELSSSKA GTFQCTLSNI DLAGFNGKTA SGSSAKLSGS MNGTLVVSGS PGTKTSTLNL SGKRVRYDSM VIGSMQCNAR HSGTRLTFDF RSAIPPASDE ASGHTPLLSV NTIEGSGTVP LHLVYFPLHV RIPEQQSINA SFRSDNLSAQ FLEYVLPFFE NAEGIIPTTL TIGGKTPKPD IYLTSSLKGT KVTVEPTQVS YLLDGDVEVN PRQIELKNIR IRDMRNGTGR INGIIRLVKL EPKTLALEAS CSKLLLFDKK DSKDETSFGT ITGSSRNMSL QGELSSPVVE GGMFIDNADF SLYRAGANES SKYIGVEKFI EFVPRYPAKS SDDSHQEGSD RPAEFYYSLL DILQIRELKL SGAEPLKYTV IFDRIRGEQL ETSISNLSLI VNKSNQNYRL YGSVNITGGK YRFSNTNFDL EDGGKITWNN AEIRDGAMDN LYGSKYISAT NTQTGERDNV RLLLAITGTL NEPRVAMGYY LNEQMQPYAS QSMLGGKPSQ IDPNAELNVI SMLLSKQWYA APGSSGQYGN IAVSSAGLSA GAGLISSQIS RIVQNIAGIE SFNVNVGVDN KGALSGLDLS FALSVPGTNG KVRFVGTGSS PDIKDKALFN YYGTSQKIEY RVTPKVYVEA YRSYGQNSST ASNTNLQKPS ETWGASVSYR ERFHSWDQFW KRVKPSSAEK K
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