Gene Clim_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0267 
Symbol 
ID6353784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp301753 
End bp306318 
Gene Length4566 bp 
Protein Length1521 aa 
Translation table11 
GC content51% 
IMG OID642667897 
Producthypothetical protein 
Protein accessionYP_001942341 
Protein GI189345812 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAAGA CTAAACGATA TATACTTGCA CTCCTGACAG GAATCTCGGC TGTCGTGCTG 
GTGCTCTCTG CGATTGCAGC TGTCGTGCTG AACAGCGGCA TGCTTGACCG ATATGCAAAA
GAACGGATAA CAACGCTTTT TAACGATGAA TATCTCGGAC GGCTTGAACT GCGGGAGGTT
CAACTGCATT TTCCGAACAG GGTGACCCTT CTCAAGCCGG AAATTTACGA ACCGGGCTCC
AGAGTCCCCG CACTTGCTGC CGAAAAAATC CGTCTGCGTT TTAATTTCCT CATGCTGCTC
CAGCCGGAAA TAACCCGGCT TTCATTCAGA AAAATAAGTG CCGACAGTCT GAACGCCTCC
GTGATTGAAA GGGCAGACGG AAAGAAAAAC CTCGACGTGA TCTTTACCTC CCGCAAGCCC
GACTCGACGA AAACGCCTTT TGAAAGCTTT TTCTGTAAAA AGCTCAACAT CACGAACGGC
AGCGCCTCAT GGACACAAGA GTCTCCGGGA AAAACGCCGC TGCGCTACAA CGCAAAAAAG
ATAACGCTCA AGCTCACCGG ATTCAGAGTC AAGGAGCAAC TGCTCAGCGG CGTTCTTGAA
AAAGCTGAGT TTTCGTTACC GGATAACCGT TTCAGCCTGC ATGAGGGGTC GGGCAAATTC
CATTTTTCCA CCAGCCGAAG TGAACTGCTT GCATTCAAGG CAAGAAGCGG AAAAAGCAAT
GCGGAATTAT CTATATCACT GAATGATTTC AATATTTTCA AGTCCGATTC GATCGGCCTC
CTGCTCGAAC GTCTTGTCGC AAGCCGTTCG TTCATCAATA TCGCAAACCT GAACCTGCAT
ACCGATGAGC TTAAAGTTTT CTTTCCGACA CTGAAACTTC CGGAAGGATT CTATACGATC
AAAGGTAATG CGAAAGCAGC TGACGGAACC CTCAGTCTGC TCGATTCGAA ACTTTCGCGC
GGCAAAAGCA GGCTTGCGCT CAGCGGAGAA ATACAGAATC TGCAGAAAAA GAACGATCTC
TCGTTCAATG CCGTCTGCGA CAGTTCAAGA ATCGAACCCG AGTTTTTAAA GGCCATACTC
ACTGAAGAAA CGCATGAAGA GTTTGCCGAA AGGCTCGGAA CCATCGAGTT TCTCGGTAAA
GCAAAGGGGA CACTGAAAAA AGCCGACACC GATTTCACCC TGATAACAGG TATCGGCAAG
GCATCACTTA AAGCCGAAGC TGCCGGCGAC CCTGAAAAAC AAATCGCATG GAAAGGGACG
TTTGCAATCG ATGACCTCGA ACCATACCGT CTCTTCGAAG CATCCGAAAA AGACATCAGA
AAAAGCCTGG TCACGGCTTC CGGAAACATT GACGGTGTCA GCGACGGGTT CAAAAGCATC
GAATCGCTCT CCCTTTCAGC CCGTCTGAAC GACTCGTTCT GGCAACTGCA GGAAATCAAA
GAAGGCACCG TTTCCCTCGA TTACAAGCGC CGCCTGCTGA AATTGACCGC TCTCCTCATG
AACAATGGAG AACAGCTCGA TGCTTCCGGC GATATCGACT TCAGCAGCGA AGTCCCCCGG
TACCGAGCGG ATGGCAGCAT GAAAAAACTC AATCTGGCAA AAGCATTCGC TTCACGCGAT
TTTATAACCG ACCTCAACGG CACCTTTGCT CTCAAAGGCG AAGGATTCGA TGCCCGCACT
CTGAATGCCG CTCTGGCAGC CCGCTTCAAA CCATCAACGA TCAATCAGTT CAGGTTCAAG
GACAATGCTG AAATAACCGC TGCCATTGCC CAGCGTGAAC ACTCGTCACT GGCTTCCCTG
AAAAGTGATT TTCTCGACAT TTCTCTCAGC GGCGACTATG CGCTCAAACA GCTCATCGCG
GTTTTACAGA TGACCGGAAA CAGCTTCGCA AGGGAGATCC GAACCCAGAG CCTCTGGAAC
ACGGGCCTGA CTTCGGGCCC CGTCCCTGAA GGATTAAGCG CCACTCAGCC GGTAAGAATA
TCTTATATGG CAGATGTGAA GGATGTCGCT CCCCTTGCGG TGCTCCTGCC GGTAAAAGAT
ATAACGCTAC AGGGACGATC GGCAGGAGAG TTGCTGTACA GGAATGGCAT GTGCACCCTG
AACTCTTCGT TCGATATCCA CTCATTCACC GGCAGCAACG GAAGTGCGCT CGGCAATGTG
ACGGCAACTG CAACTGCCGA ATGCAGCAGT ACAGGCGTAT CAAAAGCCGT GCTCAAAGGC
AAGGCGGCAA CACTGAGTGC CGCAGGCGTA AAATCCCGGA ATCTTGTTTT CGATGCGGCA
TATATTCCCG CACAGCTCAC CACCTCACTG GACGGCGAAC TGCCTGAACA GGGATGGACT
CTTGCCGCTT CATTCTCGGC AAAACGCAAC GGCAGCAGCT ATAACATCTC CCTGAACCGC
TTTTCGGCCG GAAATGGCGG AAGCCGCTGG CAGTCGGTAT CAACATCTCC TGTAGTAATT
ACCAGTTCAT CGGCACTGTT CAGCCGGTTT GCGATTGCCA AAGGAAAGCA GCAGGTCGTT
CTCGACGGAG AGTTGAGCAG CAGCAAAGCA GGAACCTTCC AGTGTACGCT CTCCAATATC
GATCTGGCAG GATTCAACGG CAAAACGGCA TCCGGTTCAT CGGCAAAACT TTCGGGATCA
ATGAACGGTA CGCTTGTTGT AAGCGGTTCT CCTGGCACAA AAACCAGTAC CCTCAATCTT
TCCGGCAAAA GAGTCCGTTA TGACTCCATG GTGATAGGCA GCATGCAGTG CAATGCGCGT
CACAGCGGAA CCAGGCTCAC GTTTGATTTC CGCAGTGCAA TCCCCCCTGC TTCCGACGAA
GCCTCAGGCC ATACTCCGCT CCTCTCGGTA AACACCATTG AAGGCAGCGG AACTGTCCCG
TTGCATCTGG TCTACTTCCC GCTGCACGTC AGAATTCCCG AGCAGCAATC CATAAACGCA
TCGTTCAGAT CGGACAACCT CTCCGCGCAG TTTCTCGAAT ATGTTCTGCC TTTTTTTGAA
AATGCCGAGG GTATCATTCC TACAACCCTC ACCATAGGAG GAAAAACCCC GAAACCTGAT
ATTTACCTTA CATCAAGCCT GAAGGGAACA AAAGTCACCG TTGAACCGAC TCAGGTAAGC
TACCTGCTCG ATGGCGATGT AGAGGTCAAT CCAAGGCAGA TCGAGCTGAA AAACATCAGA
ATAAGGGATA TGCGAAACGG AACCGGACGG ATAAACGGGA TAATCCGGCT GGTAAAGCTT
GAACCGAAAA CACTCGCTCT CGAAGCAAGC TGCTCGAAAC TGCTGCTGTT CGATAAGAAG
GACAGTAAAG ATGAGACATC TTTCGGCACC ATTACGGGCT CGAGCCGAAA TATGTCTCTG
CAGGGCGAAC TATCCTCGCC GGTTGTCGAG GGCGGCATGT TTATTGATAA TGCTGATTTT
TCACTTTACC GAGCAGGAGC GAATGAGAGC TCCAAGTATA TCGGGGTGGA GAAGTTCATC
GAATTTGTTC CCCGTTATCC CGCCAAAAGC AGCGATGATT CGCATCAGGA GGGTTCGGAC
AGACCTGCCG AATTCTACTA CTCGCTGCTC GATATTCTGC AAATCAGGGA ACTGAAGCTC
AGCGGAGCCG AACCGTTGAA ATATACGGTC ATTTTTGACC GCATCAGGGG AGAGCAGCTT
GAAACATCAA TCAGCAACCT CTCTCTTATC GTCAATAAAA GCAATCAAAA CTACCGGCTG
TATGGCTCCG TAAACATTAC CGGCGGAAAG TACCGTTTTT CCAACACGAA TTTCGATCTG
GAGGATGGCG GCAAAATCAC CTGGAACAAT GCTGAAATCC GTGATGGTGC AATGGACAAC
CTCTACGGAA GCAAGTATAT CAGCGCCACC AATACCCAGA CAGGCGAACG CGACAATGTC
CGCCTGCTGC TTGCCATAAC AGGCACCCTG AATGAACCGC GAGTTGCCAT GGGTTACTAT
CTGAACGAGC AGATGCAGCC TTACGCATCC CAAAGCATGC TCGGAGGAAA ACCAAGCCAG
ATAGACCCCA ATGCCGAGCT CAACGTTATT TCCATGCTGC TCTCGAAACA GTGGTATGCG
GCTCCTGGCA GCAGTGGTCA GTATGGAAAC ATTGCCGTAT CGAGCGCAGG GCTTTCAGCT
GGCGCCGGAC TGATCTCTTC GCAGATTTCG CGTATTGTAC AGAATATCGC CGGTATCGAA
AGTTTCAATG TCAATGTAGG CGTGGACAAT AAAGGGGCTC TCAGCGGGCT TGATCTTTCA
TTCGCACTCA GCGTACCCGG AACCAATGGA AAAGTTCGCT TTGTAGGAAC AGGAAGCAGT
CCGGATATCA AGGACAAGGC ACTGTTCAAC TATTACGGAA CATCCCAGAA AATCGAGTAC
CGCGTCACGC CCAAAGTTTA CGTGGAAGCT TACCGCTCTT ACGGCCAGAA CAGCAGCACG
GCGTCGAATA CCAACCTGCA GAAGCCTTCA GAAACCTGGG GAGCCAGCGT TTCCTACCGG
GAACGGTTCC ACTCCTGGGA TCAATTCTGG AAACGTGTTA AACCCTCATC GGCCGAGAAG
AAATAA
 
Protein sequence
MEKTKRYILA LLTGISAVVL VLSAIAAVVL NSGMLDRYAK ERITTLFNDE YLGRLELREV 
QLHFPNRVTL LKPEIYEPGS RVPALAAEKI RLRFNFLMLL QPEITRLSFR KISADSLNAS
VIERADGKKN LDVIFTSRKP DSTKTPFESF FCKKLNITNG SASWTQESPG KTPLRYNAKK
ITLKLTGFRV KEQLLSGVLE KAEFSLPDNR FSLHEGSGKF HFSTSRSELL AFKARSGKSN
AELSISLNDF NIFKSDSIGL LLERLVASRS FINIANLNLH TDELKVFFPT LKLPEGFYTI
KGNAKAADGT LSLLDSKLSR GKSRLALSGE IQNLQKKNDL SFNAVCDSSR IEPEFLKAIL
TEETHEEFAE RLGTIEFLGK AKGTLKKADT DFTLITGIGK ASLKAEAAGD PEKQIAWKGT
FAIDDLEPYR LFEASEKDIR KSLVTASGNI DGVSDGFKSI ESLSLSARLN DSFWQLQEIK
EGTVSLDYKR RLLKLTALLM NNGEQLDASG DIDFSSEVPR YRADGSMKKL NLAKAFASRD
FITDLNGTFA LKGEGFDART LNAALAARFK PSTINQFRFK DNAEITAAIA QREHSSLASL
KSDFLDISLS GDYALKQLIA VLQMTGNSFA REIRTQSLWN TGLTSGPVPE GLSATQPVRI
SYMADVKDVA PLAVLLPVKD ITLQGRSAGE LLYRNGMCTL NSSFDIHSFT GSNGSALGNV
TATATAECSS TGVSKAVLKG KAATLSAAGV KSRNLVFDAA YIPAQLTTSL DGELPEQGWT
LAASFSAKRN GSSYNISLNR FSAGNGGSRW QSVSTSPVVI TSSSALFSRF AIAKGKQQVV
LDGELSSSKA GTFQCTLSNI DLAGFNGKTA SGSSAKLSGS MNGTLVVSGS PGTKTSTLNL
SGKRVRYDSM VIGSMQCNAR HSGTRLTFDF RSAIPPASDE ASGHTPLLSV NTIEGSGTVP
LHLVYFPLHV RIPEQQSINA SFRSDNLSAQ FLEYVLPFFE NAEGIIPTTL TIGGKTPKPD
IYLTSSLKGT KVTVEPTQVS YLLDGDVEVN PRQIELKNIR IRDMRNGTGR INGIIRLVKL
EPKTLALEAS CSKLLLFDKK DSKDETSFGT ITGSSRNMSL QGELSSPVVE GGMFIDNADF
SLYRAGANES SKYIGVEKFI EFVPRYPAKS SDDSHQEGSD RPAEFYYSLL DILQIRELKL
SGAEPLKYTV IFDRIRGEQL ETSISNLSLI VNKSNQNYRL YGSVNITGGK YRFSNTNFDL
EDGGKITWNN AEIRDGAMDN LYGSKYISAT NTQTGERDNV RLLLAITGTL NEPRVAMGYY
LNEQMQPYAS QSMLGGKPSQ IDPNAELNVI SMLLSKQWYA APGSSGQYGN IAVSSAGLSA
GAGLISSQIS RIVQNIAGIE SFNVNVGVDN KGALSGLDLS FALSVPGTNG KVRFVGTGSS
PDIKDKALFN YYGTSQKIEY RVTPKVYVEA YRSYGQNSST ASNTNLQKPS ETWGASVSYR
ERFHSWDQFW KRVKPSSAEK K